Hello,
My apologies if this has been posted elsewhere, I have had a look at several threads but I am still confused how to use these functions. I have two files, each with 5 columns:
File A: (tab-delimited)
PDB CHAIN Start End Fragment
1avq A 171 176 awyfan
1avq A 172 177 wyfany
1c7k A 2 7... (3 Replies)
I am trying to join a few hundred files using join. Is there a way to use while read or something else to automate this. My problem is the following.
Day 1
City Temp
ABC 20
DEF 30
HIJ 15
Day 2
City Temp
ABC 22
DEF 29
KLM 5
Day 3 (3 Replies)
Hi guys,
say I have a few files in a directory (58 text files or somthing)
each one contains mulitple strings that I wish to replace with other strings
so in these 58 files I'm looking for say the following strings:
JAM (replace with BUTTER)
BREAD (replace with CRACKER)
SCOOP (replace... (19 Replies)
Hi I am new to shell scripting. There is a requirement to write a shell script to meet follwing needs.Prompt reply shall be highly appreciated.
script that will compare two config files and produce 2 outputs - actual config file and a report indicating changes made.
OS :Susi linux ver 10.3.
... (4 Replies)
Hi,
I have 20 tab delimited text files that have a common column (column 1). The files are named GSM1.txt through GSM20.txt. Each file has 3 columns (2 other columns in addition to the first common column).
I want to write a script to join the files by the first common column so that in the... (5 Replies)
Hi there,
I am trying to join 24 files (i showed example of 3 files below). They all have 2 columns. The first columns is common to all. The files are tab delimited eg
file 1
rs0001 100e-34
rs0003 2.8e-01
rs008 1.9e-90
file 2
rs0001 1.98e-22
rs0004 3.77e-10... (4 Replies)
Please help, I want to join multiple files based on column 1, and put the missing values as 0. Also the colname in the output should say which file the values came from.
FILE1
1 11
2 12
3 13
FILE2
2 22
3 23
4 24
FILE3
1 31
3 33
4 34
FILE1 FILE2 FILE3
1 11 0 31 (1 Reply)
I would like to join two files when two columns in each file matches with each other and then produce an output when taking multiple columns.
Like I have file A
1234,ABCD,23,JOHN,NJ,USA
2345,ABCD,24,SAM,NY,USA
5678,GHIJ,24,TOM,NY,USA
5678,WXYZ,27,MAT,NJ,USA
and file B
... (2 Replies)
Hello all,
I want to join 2 tabbed files on the first 2 fields, and filling the missing values with 0. The 3rd column in each file is constant for the entire file.
file1
12658699 ST5 XX2720 0 1 0 1
53039541 ST5 XX2720 1 0 1.5 1
file2 ... (6 Replies)
Discussion started by: sheetalk
6 Replies
LEARN ABOUT CENTOS
rlam
RLAM(1) General Commands Manual RLAM(1)NAME
rlam - laminate records from multiple files
SYNOPSIS
rlam [ -tS ][ -u ][ -iaN | -ifN | -idN | -iiN | -iwN | -ibN ] input1 input2 ..
DESCRIPTION
Rlam simply joins records (or lines) from multiple inputs, separating them with the given string (TAB by default). Different separators
may be given for different files by specifying additional -t options in between each file name. Note that there is no space between this
option and its argument. If none of the input files uses an ASCII separator, then no end-of-line character will be printed, either.
An input is either a stream or a command. Commands are given in quotes, and begin with an exclamantion point ('!'). If the inputs do not
have the same number of lines, then shorter files will stop contributing to the output as they run out.
The -ia option may be used to specify ASCII input (the default), or the -if option may be used to indicated binary IEEE 32-bit floats on
input. Similarly, the -id and -ii options may be used to indicate binary 64-bit doubles or integer words, respectively. The -iw option
specifies 2-byte short words, and the -ib option specifies bytes. If a number is immediately follows any of these options, then it indi-
cates that multiple such values are expected for each record. For example, -if3 indicates three floats per input record for the next named
input. In the case of the -ia option, no number indicates one line per input record, and numbers greater than zero indicate that many
characters exactly per record. For binary input formts, no number implies one value per record. For anything other than EOL-separated
input, the default tab separator is reset to the empty string.
A hyphen ('-') by itself can be used to indicate the standard input, and may appear multiple times. The -u option forces output after each
record (i.e., one run through inputs).
EXAMPLE
To join files output1 and output2, separated by a comma:
rlam -t, output1 output2
To join a file with line numbers (starting at 0) and its reverse:
cnt `wc -l < lam.c` | rlam - -t: lam.c -t '!tail -r lam.c'
To join four data files, each having three doubles per record:
rlam -id3 file1.dbl file2.dbl file3.dbl file4.dbl > combined.dbl
AUTHOR
Greg Ward
SEE ALSO cnt(1), histo(1), neaten(1), rcalc(1), tabfunc(1), total(1)RADIANCE 7/8/97 RLAM(1)