How would I echo the same results to two files? One is a running log, and the other is a cache, or sort.
echo "Hello World" >> /Logs/File1 & /tmp/file2
I would just copy it from one place to the other, but the Log keeps history, where I want the /tmp to hold only stuff per session. I tried... (2 Replies)
Hi folks,
Please advise which command/command line shall I run;
1) to display the command and its output on console
2) simultaneous to save the command and its output on a file
I tried tee command as follows;
$ ps aux | grep mysql | tee /path/to/output.txt
It displayed the... (7 Replies)
Hi
We are having a requirement where one shell script, say a.sh (which uses Java and connects to Oracle database using JDBC) keeps on running everytime. I created a wrapper (to check whether a.sh is running and if not then to start it) and scheduled it in the crontab. Now all the output from... (3 Replies)
Dear Master.
Help me to command to out put.
Ex log.
"<?xml version=""1.0"" encoding=""UTF-10"" ?><anova-test-bom>
<txid>17251032659</txid>
<authentication>
<user>admin</user>
<password>Amrduoi</password>
</authentication>
<destination>
<msisdn>1111111</msisdn>
... (2 Replies)
hi ,
i am using iostat -nmzx 1 | awk '{ print $4 }' command to get the i/o rates of disks.
but i want command output in a file , how can i capture , this is some what difficult because command output is keep on changing , any way i have to get total output of the command .
please help me .... (1 Reply)
cat doc | nawk -v da="${date}" '$23>199 {print $0 > "doc"+da+".txt"}'
Every time(need to run every day) i run this, i want to a create a new file "doc_01 Aug.txt".
Basically, i want to create a new file with date appended in it.
The above command is creating a file with name "0".... (4 Replies)
I ran the following command.
cat abc.c > abc.c
I got message the following message from command cat:
cat: abc.c : input file is same as the output file
How the command came to know of the destination file name as the command is sending output to standard file. (3 Replies)
Hi.
Before I've post this question, I have spent hours looking for the solutions but to no avail. Because I think it is possible but I just don't know what is the right keyword to search for.
Ok, basically what I want to achieve is really simple.
It's just that I don't want to write... (20 Replies)
I am using UNIX to create a script on our system. I have setup my commands to append their output to an outage file. However, some of the commands return no output and so I would like something to take their place.
What I need
The following command is placed at the prompt:
TICLI... (4 Replies)
Hi,
I have a peculiar issue w.r.t redirecting the command output to a file when using loop.
I am redirecting command output to same file in a series of if condition statements, but if one block of if condition statement writes the log to the file , the subsequent block of if condition... (7 Replies)
Discussion started by: ananan
7 Replies
LEARN ABOUT DEBIAN
proftmb
PROFTMB(1) User Commands PROFTMB(1)NAME
proftmb - per-residue prediction of bacterial transmembrane beta barrels
SYNOPSIS
proftmb [options]
DESCRIPTION
proftmb predicts bacterial transmembrane beta barrels from sequence using profile fed Hidden Markov Models (HMM).
Output format
Self-annotating. Letters of prediction: 'i' - inside cytoplasm, 'O' - outside cytoplasm, 'U' - up (on chain moving out of cytoplasm), 'D'
- down (on chain moving into cytoplasm).
References
Bigelow, H. and Rost, B. (2006). PROFtmb: a web server for predicting bacterial transmembrane beta barrel proteins. Nucleic Acids Res,
34(Web Server issue), W186-8.
To invoke the menu, type:
proftmb --menu
The options are:
-d, --directory-root <STRING>
root path where files (options -s,-r,-l,-a,-e,-t,-u,-z,-n) reside
-a, --reduction-state-decode <STRING>
state reduction for decoding
-b, --reduction-state-report <STRING>
state reduction for reporting
-m, --membrane-strand-states <STRING>
list of membrane strand states
-z, --z-curve-file
<STRING> file containing means and sd's at integral length values
-x, --z-calibration-curve <STRING>
file mapping coverage and accuracy values to z-scores
-n, --null-frequency <STRING>
background frequency file
-c, --minimum-score-cutoff <DOUBLE>
minimum z-score for per-residue prediction
-o, --outfile-prefix <STRING>
output file prefix for the three files generated: PREFIX_dat.txt, PREFIX_proftmb_pretty.txt PREFIX_proftmb_tabular.txt
-s, --static-model-data <STRING>
data representing the model architecture
-t, --trained-params <STRING>
params representing the encoded training data
-q, --test-blastQ-file-or-dir <STRING>
psiblast profile (-Q) or directory (full pathname or relative to current directory) with many profiles
-w, --single-sequence-name <STRING>
if -q option points to a single file, this is the name
-v, --list-blastQ-files <STRING>
list of psiblast files to process in directory (leave blank to process all files)
--outfile-pretty <STRING>
pretty output file (overrides automatic name PREFIX_proftmb_pretty.txt)
--outfile-tab
<STRING> tabulated output file (overrides automatic name PREFIX_proftmb_tabular.txt)
--outfile-dat
<STRING> data output file (overrides automatic name PREFIX_dat.txt)
--version
<BOOL> output version information and exit
--quiet
<BOOL> be quiet
EXAMPLES
proftmb @/usr/share/proftmb/options -q /usr/share/doc/proftmb/examples/example.Q -o /tmp/example
The above produces 3 output files: /tmp/example_proftmb_tabular.txt, /tmp/example_proftmb_pretty.txt and /tmp/example_dat.txt. Compare
these to the examples in /usr/share/doc/proftmb/examples.
BUGS
Please report bugs at <https://rostlab.org/bugzilla3/enter_bug.cgi?product=proftmb>.
COPYRIGHT
Copyright (C) 2004 Henry Bigelow
This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
This package is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MER-
CHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/>.
proftmb 1.1.10 February 2012 PROFTMB(1)