Dears,
I would like to count the number of "(" and ")" that occur in a file.
(syntax checking script). I tried to use "grep -c" and this works fine as long as there is only one character (for which I do a search) on a line.
Has anyone an idea how I can count the number of specific characters... (6 Replies)
I have a comma delimited file that roughly has 300 fields. Not all fields are populated.
This file is fed into another system, what I need to do is count the amount of characters in each field and give me an output similiar to this:
1 - 6,2 - 25
The first number is the field and the second... (2 Replies)
I want to list the occurence of particular characters in a line. my file looks like this
a,b,c,d
e,f,g
h,y:e,g,y s
f;g,s,w
and I want to count how many commas are in each line so the file in the end looks like this:
a,b,c,d 3
e,f,g 2
h,y:e,g,y s 3
f;g,s,w ... (2 Replies)
Hi All,
I need some help in counting the number of letters in a big file with separations.
Following is the file I have
>AB_1
MLKKPIIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFM
IQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQDVIIVEGILVLEDERLRDLMDIKLFVDTDDDIRII... (6 Replies)
Ok say I wanted to count every Y in a data file.
Then set Y as my delimiter so that I can separate my file by taking all the contents that occur BEFORE the first Y and store them in a variable so that I may use this content later on in my program. Then I could do the same thing with the next Y's... (5 Replies)
I do have a big file in the following format
>A1
ATGCGG
>A2
TCATGC
>A3
-TGCTG
The number of characters will be same under each subheader and only possible characters are A,T,G,C and -
I want to count the number of A's, T's,G's, C's & -'s vertically for all the positions so that I... (5 Replies)
Hi All, here's a question from newbie
I have a data like this, which set of small DNA sequences separated by new line
GAATCCGGAAACAGCAACTTCAAANCA
GTNATTCGGGCCAAACTGTCGAA
TTNGGCAACTGTTAGAGCTCATGCGACA
CCTGCTAAACGAGTTCGAGTTGAANGA
TTNCGGAAGTGGTCGCTGGCACGG
ACNTGCATGTACGGAGTGACGAAACCI... (6 Replies)
Discussion started by: amits22
6 Replies
LEARN ABOUT MOJAVE
perlivp
PERLIVP(1) Perl Programmers Reference Guide PERLIVP(1)NAME
perlivp - Perl Installation Verification Procedure
SYNOPSIS
perlivp [-p] [-v] [-h]
DESCRIPTION
The perlivp program is set up at Perl source code build time to test the Perl version it was built under. It can be used after running:
make install
(or your platform's equivalent procedure) to verify that perl and its libraries have been installed correctly. A correct installation is
verified by output that looks like:
ok 1
ok 2
etc.
OPTIONS -h help
Prints out a brief help message.
-p print preface
Gives a description of each test prior to performing it.
-v verbose
Gives more detailed information about each test, after it has been performed. Note that any failed tests ought to print out some
extra information whether or not -v is thrown.
DIAGNOSTICS
o print "# Perl binary '$perlpath' does not appear executable.
";
Likely to occur for a perl binary that was not properly installed. Correct by conducting a proper installation.
o print "# Perl version '$]' installed, expected $ivp_VERSION.
";
Likely to occur for a perl that was not properly installed. Correct by conducting a proper installation.
o print "# Perl @INC directory '$_' does not appear to exist.
";
Likely to occur for a perl library tree that was not properly installed. Correct by conducting a proper installation.
o print "# Needed module '$_' does not appear to be properly installed.
";
One of the two modules that is used by perlivp was not present in the installation. This is a serious error since it adversely affects
perlivp's ability to function. You may be able to correct this by performing a proper perl installation.
o print "# Required module '$_' does not appear to be properly installed.
";
An attempt to "eval "require $module"" failed, even though the list of extensions indicated that it should succeed. Correct by
conducting a proper installation.
o print "# Unnecessary module 'bLuRfle' appears to be installed.
";
This test not coming out ok could indicate that you have in fact installed a bLuRfle.pm module or that the "eval " require
"$module_name.pm"; "" test may give misleading results with your installation of perl. If yours is the latter case then please let
the author know.
o print "# file",+($#missing == 0) ? '' : 's'," missing from installation:
";
One or more files turned up missing according to a run of "ExtUtils::Installed -> validate()" over your installation. Correct by
conducting a proper installation.
For further information on how to conduct a proper installation consult the INSTALL file that comes with the perl source and the README
file for your platform.
AUTHOR
Peter Prymmer
perl v5.18.2 2018-08-17 PERLIVP(1)