Hi All,
I have one file that sits on 4 diffrent servers, those servers are diffrent region based and they are authentication protected and that file has a diff port numbers, so when run the script it must ask my login details,region of server and port no for that file once it took from me... (1 Reply)
Greetings.
So the question is basically the same as it's in the title.
I'd like to write a program that changes a file by rows. So to clarify it.
(i know i shouldn't use code,/code here but i would like to separate it)
So for example a text file looks like something like this:
Happy... (5 Replies)
Input file
>Read_1
XXXXXXXXXXSDFXXXXXDS (condition 1: After the last "X" per line, if the distance is less than or equal to 3 letter, replace those not "X" letter with "X")
TREXXXXXXXSDFXXXXXDS (condition 2: Before the first "X" per line, if the distance is less than or equal to 3 letter,... (12 Replies)
Good day to you all,
Just want to check here, i know when scping a file, size might change due to space issue. it might sound silly, but does file content get change too? if so, what kind of situation that might be? (1 Reply)
Arun kumar something somehting Enterting in to the line
.
.
.
.
Some text text Finshing the sentence
Some other text
.
.
.
.
Again something somehting Enterting in to the line
.
.
.
.
.
.
Again text text Finshing the sentence (6 Replies)
Input file
data_2 USA
data_2 JAPAN
data_3 UK
data_4 Brazil
data_5 Singapore
data_5 Indo
data_5 Thailand
data_6 China
Desired output file
data_2 USA/JAPAN
data_3 UK
data_4 Brazil
data_5 Singapore/Indo/Thailand
data_6 China
I would like to merge all data content that share same... (2 Replies)
Hi,
i have a file input.txt
Continent North America
Country USA Capital Washington D.C.
Country Canada Capital Ottawa
Continent South America
Country Argentina Capital Buenos Aires
Country Brazil Capital Brasília
Coutry Colombia Capital Bogotá
and i want to get an output.txt
... (3 Replies)
Hello,
I would like to change the content of the file that has few blocks starts with 10 and ends with ";"
File1.txt
10 bonuses D
20 MATCHED
30 UPD COL
40 (SOL=30)
20 NOT MATCHED
30 INS COL
40 (SOL=30)
;
10 bonuses D
20 MATCHED
30 UPD COL
40... (5 Replies)
Discussion started by: Mannu2525
5 Replies
LEARN ABOUT DEBIAN
bio::map::positionhandleri
Bio::Map::PositionHandlerI(3pm) User Contributed Perl Documentation Bio::Map::PositionHandlerI(3pm)NAME
Bio::Map::PositionHandlerI - A Position Handler Interface
SYNOPSIS
# do not use this module directly
# See Bio::Map::PositionHandler for an example of
# implementation.
DESCRIPTION
This interface describes the basic methods required for Position Handlers. A Position Handler copes with the coordination of different
Bio::Map::EntityI objects, adding and removing them from each other and knowning who belongs to who. These relationships between objects
are based around shared Positions, hence PositionHandler.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Sendu Bala
Email bix@sendu.me.uk
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
General methods
register
Title : register
Usage : $position_handler->register();
Function: Ask this Position Handler to look after your entity relationships.
Returns : n/a
Args : none
index
Title : index
Usage : my $index = $position_handler->index();
Function: Get the unique registry index for yourself, generated during the
resistration process.
Returns : int
Args : none
get_entity
Title : get_entity
Usage : my $entity = $position_handler->get_entity($index);
Function: Get the entity that corresponds to the supplied registry index.
Returns : Bio::Map::EntityI object
Args : int
Methods for Bio::Map::PositionI objects
map
Title : map
Usage : my $map = $position_handler->map();
$position_handler->map($map);
Function: Get/Set the map you are on. You must be a Position.
Returns : L<Bio::Map::MapI>
Args : none to get, OR
new L<Bio::Map::MapI> to set
element
Title : element
Usage : my $element = $position_handler->element();
$position_handler->element($element);
Function: Get/Set the map element you are for. You must be a Position.
Returns : L<Bio::Map::MappableI>
Args : none to get, OR
new L<Bio::Map::MappableI> to set
Methods for all other Bio::Map::EntityI objects
add_positions
Title : add_positions
Usage : $position_handler->add_positions($pos1, $pos2, ...);
Function: Add some positions to yourself. You can't be a position.
Returns : n/a
Args : Array of Bio::Map::PositionI objects
get_positions
Title : get_positions
Usage : my @positions = $position_handler->get_positions();
Function: Get all your positions. You can't be a Position.
Returns : Array of Bio::Map::PositionI objects
Args : none for all, OR
Bio::Map::EntityI object to limit the Positions to those that
are shared by you and this other entity.
purge_positions
Title : purge_positions
Usage : $position_handler->purge_positions();
Function: Remove all positions from yourself. You can't be a Position.
Returns : n/a
Args : none to remove all, OR
Bio::Map::PositionI object to remove only that entity, OR
Bio::Map::EntityI object to limit the removal to those Positions that
are shared by you and this other entity.
get_other_entities
Title : get_other_entities
Usage : my @entities = $position_handler->get_other_entities();
Function: Get all the entities that share your Positions. You can't be a
Position.
Returns : Array of Bio::Map::EntityI objects
Args : none
perl v5.14.2 2012-03-02 Bio::Map::PositionHandlerI(3pm)