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Top Forums UNIX for Dummies Questions & Answers Extract numbers from .txt file Post 302445271 by eggali on Sunday 15th of August 2010 02:10:50 AM
Old 08-15-2010
Extract numbers from .txt file

I need to extract all the p-value numbers and the rho numbers from a .txt file and write them as coma separated values in a new file. Ideally I would get two files in the end, one for p- values and one for rho. Any suggestions? I appreciate your help!!!

The .txt file looks essentially like this but is much bigger.


Code:
	Spearman's rank correlation rho

data:  x[, 2] and x[, n] 
S = 969275.3, p-value = 0.1915
alternative hypothesis: true rho is not equal to 0 
sample estimates:
       rho 
0.09620046 


	Spearman's rank correlation rho

data:  x[, 2] and x[, n] 
S = 641188.7, p-value = 6.52e-10
alternative hypothesis: true rho is not equal to 0 
sample estimates:
      rho 
0.4301456 


	Spearman's rank correlation rho

data:  x[, 2] and x[, n] 
S = 1039343, p-value = 0.402
alternative hypothesis: true rho is not equal to 0 
sample estimates:
       rho 
0.06146867 


	Spearman's rank correlation rho

data:  x[, 2] and x[, n] 
S = 900824, p-value = 0.005946
alternative hypothesis: true rho is not equal to 0 
sample estimates:
      rho 
0.1993957 


	Spearman's rank correlation rho

data:  x[, 2] and x[, n] 
S = 747354.1, p-value = 2.317e-06
alternative hypothesis: true rho is not equal to 0 
sample estimates:
      rho 
0.3357915


Last edited by Scott; 08-15-2010 at 10:13 AM.. Reason: Please use code tags
 

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dos2unix(1)						      General Commands Manual						       dos2unix(1)

NAME
dos2unix - DOS/MAC to UNIX text file format converter SYNOPSYS
dos2unix [options] [-c convmode] [-o file ...] [-n infile outfile ...] Options: [-hkqV] [--help] [--keepdate] [--quiet] [--version] DESCRIPTION
This manual page documents dos2unix, the program that converts plain text files in DOS/MAC format to UNIX format. OPTIONS
The following options are available: -h --help Print online help. -k --keepdate Keep the date stamp of output file same as input file. -q --quiet Quiet mode. Suppress all warning and messages. -V --version Prints version information. -c --convmode convmode Sets conversion mode. Simulates dos2unix under SunOS. -o --oldfile file ... Old file mode. Convert the file and write output to it. The program default to run in this mode. Wildcard names may be used. -n --newfile infile outfile ... New file mode. Convert the infile and write output to outfile. File names must be given in pairs and wildcard names should NOT be used or you WILL lost your files. EXAMPLES
Get input from stdin and write output to stdout. dos2unix Convert and replace a.txt. Convert and replace b.txt. dos2unix a.txt b.txt dos2unix -o a.txt b.txt Convert and replace a.txt in ASCII conversion mode. Convert and replace b.txt in ISO conversion mode. Convert c.txt from Mac to Unix ascii format. dos2unix a.txt -c iso b.txt dos2unix -c ascii a.txt -c iso b.txt dos2unix -c mac a.txt b.txt Convert and replace a.txt while keeping original date stamp. dos2unix -k a.txt dos2unix -k -o a.txt Convert a.txt and write to e.txt. dos2unix -n a.txt e.txt Convert a.txt and write to e.txt, keep date stamp of e.txt same as a.txt. dos2unix -k -n a.txt e.txt Convert and replace a.txt. Convert b.txt and write to e.txt. dos2unix a.txt -n b.txt e.txt dos2unix -o a.txt -n b.txt e.txt Convert c.txt and write to e.txt. Convert and replace a.txt. Convert and replace b.txt. Convert d.txt and write to f.txt. dos2unix -n c.txt e.txt -o a.txt b.txt -n d.txt f.txt DIAGNOSTICS
BUGS
The program does not work properly under MSDOS in stdio processing mode. If you know why is that so, please tell me. AUTHORS
Benjamin Lin - <blin@socs.uts.edu.au> Bernd Johannes Wuebben (mac2unix mode) <wuebben@kde.org> MISCELLANY
Tested environment: Linux 1.2.0 with GNU C 2.5.8 SunOS 4.1.3 with GNU C 2.6.3 MS-DOS 6.20 with Borland C++ 4.02 Suggestions and bug reports are welcome. SEE ALSO
unix2dos(1) mac2unix(1) 1995.03.31 dos2unix v3.0 dos2unix(1)
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