I'm new of UNIX shell scripting. I'm recently generating a excel report in UNIX(file with delimiter is fine). How should I make a script to do it?
1 file to join comes from output of one UNIX command, the second from another UNIX command, and third from a database query. The key columes of all... (7 Replies)
Hi all,
I searched through the forum but i can't manage to find a solution. I need to join a set of files placed in a directory (~1600) by column, and obtain an output with first and second column common to each file, but following columns are taken from the file in the list (precisely the fourth... (10 Replies)
I have n files (for ex:64 files) with one similar column. Is it possible to combine them all based on that column ?
file1
ax100 20 30 40
ax200 22 33 44
file2
ax100 10 20 40
ax200 12 13 44
file2
ax100 0 0 4
ax200 2 3 4 (9 Replies)
Dear Forum,
Full title of the topic would be: "Join 3 or more files using matching column without full list in any of these columns"
I have several, typically 3 or 4 files which I need to join, something like FULL JOIN in slq scripts, all combinations of matches should be printed into an... (3 Replies)
Hi All,
I am trying to join to files based on one common column.
Cat File1
ID HID
Ab_1 23
Cd 45
df 22
Vv 33
Cat File2
ID pval
Ab_1 0.3
Cd 10
Vv 0.0444 (3 Replies)
Hi,
I have 20 tab delimited text files that have a common column (column 1). The files are named GSM1.txt through GSM20.txt. Each file has 3 columns (2 other columns in addition to the first common column).
I want to write a script to join the files by the first common column so that in the... (5 Replies)
Hi all,
I'm trying to join two .txt file tab delimitated based on a common column.
File 1
transcript_id gene_id length effective_length expected_count TPM FPKM IsoPct
comp1000201_c0_seq1 comp1000201_c0 337 183.51 0.00 0.00 0.00 0.00
comp1000297_c0_seq1 ... (1 Reply)
I have file input
file1
1/1/2013 A 553.0763397 96 16582
1/1/2013 B 459.8333588 195 11992
1/2/2013 A 844.2973022 306 19555
1/2/2013 B 833.9300537 457 20165
1/3/2013 A 563.6917419 396 13879
1/3/2013 B 632.0749969 169 ... (1 Reply)
Dear All,
I have many files formatted like this:
file1.txt:
1/2-SBSRNA4 18
A1BG 3
A1BG-AS1 6
A1CF 0
A2LD1 1
A2M 1160
file2.txt
1/2-SBSRNA4 53
A1BG 1
A1BG-AS1 7
A1CF 0
A2LD1 3
A2M 2780 (5 Replies)
Discussion started by: paolo.kunder
5 Replies
LEARN ABOUT NETBSD
zfgrep
ZGREP(1) BSD General Commands Manual ZGREP(1)NAME
zgrep, zegrep, zfgrep -- print lines matching a pattern in gzip-compressed files
SYNOPSIS
zgrep [grep-flags] [--] pattern [files ...]
zegrep [grep-flags] [--] pattern [file ...]
zfgrep [grep-flags] [--] pattern [file ...]
DESCRIPTION
zgrep runs grep(1) on files or stdin, if no files argument is given, after decompressing them with zcat(1).
The grep-flags and pattern arguments are passed on to grep(1). If an -e flag is found in the grep-flags, zgrep will not look for a pattern
argument.
zegrep calls egrep(1), while zfgrep calls fgrep(1).
EXIT STATUS
In case of missing arguments or missing pattern, 1 will be returned, otherwise 0.
SEE ALSO egrep(1), fgrep(1), grep(1), gzip(1), zcat(1)AUTHORS
Thomas Klausner <wiz@NetBSD.org>
BSD December 28, 2003 BSD