I need to read pairs of lines from a file and compare them. We can assume that the number of lines in the file is even. Can i do it in korn shell? (4 Replies)
I have a few lines like --
feature 1,
subfeat 0,
type 3,
subtype 1,
value 0,
--
feature 1,
subfeat 0,
type 1,
subtype 1,
value 0,
I would like to concatenate the... (1 Reply)
Does anyone know a way I can fix my file below where it has lines that are cut?
Just like the (notice the space before ms,c=PH)..
dn: cn=english,ou=Messaging,ou=lang,o=subject,t=j
ms,c=PH
which should be
dn: cn=english,ou=Messaging,ou=lang,o=subject,t=jms,c=PH
The whole text file... (5 Replies)
Hi,
I have a file such as:
---
>contig00001 length=35524 numreads=2944
gACGCCGCGCGCCGCGGCCAGGGCTGGCCCA
CAGGCCGCGCGGCGTCGGCTGGCTGAG
>contig00002 length=4242 numreads=43423
ATGCCGAAGGTCCGCCTGGGGCTGG
CGCCGGGAGCATGTAGCG
---
I would like to concatenate the lines not starting with ">"... (9 Replies)
This seems to be a question whose answer uses sed or awk.
For a file like:
a
b
c
d
e
How to swap the order of the line pairs, to end up with:
b
a
d
c
e
All lines from the original file need to wind up in the output file. (8 Replies)
Hi experts,
e.g.
i/p data looks like
0000xm7zcNDIkP888vRqGv93xA7:176n00qql||9700005405552747,9700005405717924,9700005405733788|unidentified,unidentified,unidentified||
o/p data should like -
row1: 0000xm7zcNDIkP888vRqGv93xA7:176n00qql||9700005405552747|unidentified
... (1 Reply)
I have a file in which the data is stored in pairs of lines. The first line (beginining with ">") is a header, the second line is a sequence.
I would like to sort the file by species name. Desired output for the example file:
I can use
sort -t'_' -k2
to alphabetize headers in the... (1 Reply)
Hi. I'm new to this forum.
I am attempting to parse an Audit Log from Cognos/TM1, selecting only Event IDs of "client" which are found on the "start-tag" record. These Logs are in a pseudo-XML format but not a true XML format. I want to FTP an Audit Log File from the Cognos server to our UNIX... (7 Replies)
I have a file with four columns like
dmn10003t1 PF00001 PF00022 dmn12390t1
dmn10008t1 PF00069 PF00027 dmn9781t1
dmn10008t1 PF00068 PF00027 dmn9781t1
dmn10008t1 PF00069 PF00069 dmn9781t1
dmn12390t1 PF00069 PF00076 dmn10003t1
I want to create a new file by comparing the repeated word pairs... (2 Replies)
Hi,
I would like to batch concatenate files by pairs. I have quite a few of them so I would not like to do that pair by pair separately.
the names of the file is of the type:
file1.fastq
newfile1_new.fastq
file2.fastq
newfile2_new.fastq
and so on...
I would like to concatenate file1... (2 Replies)
Discussion started by: jawad
2 Replies
LEARN ABOUT DEBIAN
sge_user
USER(5) Sun Grid Engine File Formats USER(5)NAME
user - Sun Grid Engine user entry file format
DESCRIPTION
A user entry is used to store ticket and usage information on a per user basis. Maintaining user entries for all users participating in a
Sun Grid Engine system is required if Sun Grid Engine is operated under a user share tree policy.
If the enforce_user cluster configuration parameter is set to auto, a user object for the submitting user will be created automatically
during job submission, if one does not already exist. The auto_user_oticket, auto_user_fshare, auto_user_default_project, and
auto_user_delete_time cluster configuration parameters will be used as default attributes of the new user object.
A list of currently configured user entries can be displayed via the qconf(1)-suserl option. The contents of each enlisted user entry can
be shown via the -suser switch. The output follows the user format description. New user entries can be created and existing can be modi-
fied via the -auser, -muser and -duser options to qconf(1).
Note, Sun Grid Engine allows backslashes () be used to escape newline (
ewline) characters. The backslash and the newline are replaced
with a space (" ") character before any interpretation.
FORMAT
A user entry contains four parameters:
name
The user name as defined for user_name in sge_types(1).
oticket
The amount of override tickets currently assigned to the user.
fshare
The current functional share of the user.
default_project
The default project of the user.
delete_time
Note: Deprecated, may be removed in future release.
The wall-clock time when this user will be deleted, expressed as the number of seconds elapsed since January 1, 1970. If set to zero, the
affected user is a permanent user. If set to one, the user currently has active jobs. For additional information about automatically cre-
ated users, see the enforce_user and auto_user_delete_time parameters in sge_conf(5).
SEE ALSO sge_intro(1), sge_types(1), qconf(1). sge_conf(5).
COPYRIGHT
See sge_intro(1) for a full statement of rights and permissions.
SGE 6.2u5 $Date$ USER(5)