I need to read pairs of lines from a file and compare them. We can assume that the number of lines in the file is even. Can i do it in korn shell? (4 Replies)
I have a few lines like --
feature 1,
subfeat 0,
type 3,
subtype 1,
value 0,
--
feature 1,
subfeat 0,
type 1,
subtype 1,
value 0,
I would like to concatenate the... (1 Reply)
Does anyone know a way I can fix my file below where it has lines that are cut?
Just like the (notice the space before ms,c=PH)..
dn: cn=english,ou=Messaging,ou=lang,o=subject,t=j
ms,c=PH
which should be
dn: cn=english,ou=Messaging,ou=lang,o=subject,t=jms,c=PH
The whole text file... (5 Replies)
Hi,
I have a file such as:
---
>contig00001 length=35524 numreads=2944
gACGCCGCGCGCCGCGGCCAGGGCTGGCCCA
CAGGCCGCGCGGCGTCGGCTGGCTGAG
>contig00002 length=4242 numreads=43423
ATGCCGAAGGTCCGCCTGGGGCTGG
CGCCGGGAGCATGTAGCG
---
I would like to concatenate the lines not starting with ">"... (9 Replies)
This seems to be a question whose answer uses sed or awk.
For a file like:
a
b
c
d
e
How to swap the order of the line pairs, to end up with:
b
a
d
c
e
All lines from the original file need to wind up in the output file. (8 Replies)
Hi experts,
e.g.
i/p data looks like
0000xm7zcNDIkP888vRqGv93xA7:176n00qql||9700005405552747,9700005405717924,9700005405733788|unidentified,unidentified,unidentified||
o/p data should like -
row1: 0000xm7zcNDIkP888vRqGv93xA7:176n00qql||9700005405552747|unidentified
... (1 Reply)
I have a file in which the data is stored in pairs of lines. The first line (beginining with ">") is a header, the second line is a sequence.
I would like to sort the file by species name. Desired output for the example file:
I can use
sort -t'_' -k2
to alphabetize headers in the... (1 Reply)
Hi. I'm new to this forum.
I am attempting to parse an Audit Log from Cognos/TM1, selecting only Event IDs of "client" which are found on the "start-tag" record. These Logs are in a pseudo-XML format but not a true XML format. I want to FTP an Audit Log File from the Cognos server to our UNIX... (7 Replies)
I have a file with four columns like
dmn10003t1 PF00001 PF00022 dmn12390t1
dmn10008t1 PF00069 PF00027 dmn9781t1
dmn10008t1 PF00068 PF00027 dmn9781t1
dmn10008t1 PF00069 PF00069 dmn9781t1
dmn12390t1 PF00069 PF00076 dmn10003t1
I want to create a new file by comparing the repeated word pairs... (2 Replies)
Hi,
I would like to batch concatenate files by pairs. I have quite a few of them so I would not like to do that pair by pair separately.
the names of the file is of the type:
file1.fastq
newfile1_new.fastq
file2.fastq
newfile2_new.fastq
and so on...
I would like to concatenate file1... (2 Replies)
Discussion started by: jawad
2 Replies
LEARN ABOUT HPUX
fmt
fmt(1) General Commands Manual fmt(1)NAME
fmt - format text
SYNOPSIS
width] [file...]
DESCRIPTION
The command is a simple text formatter that fills and joins lines to produce output lines of (up to) the number of characters specified in
the width option. The default width is 72. concatenates the arguments. If none are given, formats text from the standard input.
Blank lines are preserved in the output, as is the spacing between words. does not fill lines beginning with a period for compatibility
with Nor does it fill lines starting with
Indentation is preserved in the output and input lines with differing indentation are not joined (unless is used).
can also be used as an in-line text filter for the command:
reformats the text between the cursor location and the end of the paragraph.
Options
recognizes the following options:
Crown margin mode.
Preserve the indentation of the first two lines within a paragraph and align the left margin of each subsequent line with that
of the second line. This is useful for tagged paragraphs.
Split lines only.
Do not join short lines to form longer ones. This prevents sample lines of code, and other such "formatted" text, from being
unduly combined.
Fill output lines to up to
width columns.
WARNINGS
The width option is acceptable for BSD compatibility, but it may go away in future releases.
SEE ALSO nroff(1), vi(1).
fmt(1)