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Full Discussion: grep FASTA files
Top Forums UNIX for Dummies Questions & Answers grep FASTA files Post 302430210 by pseudocoder on Thursday 17th of June 2010 01:27:06 AM
Old 06-17-2010
Maybe this?
Code:
$ perl -nle 'if ($a == 0) { push @x, $_; $a=1; next; }
             if ($a == 1 && length($_) >=11 && length($_) <= 17)
             { print @x; print $_; $a=0; @x=(); }
             else { $a=0; @x=(); }' fasta-file

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smd-push(1)						 Sync Mail Dir (smd) documentation					       smd-push(1)

NAME
smd-push - syncs the remote mail dir letting the local one untouched SYNOPSIS
smd-push [-d|--dry-run] [-v|--verbose] [-s|--show-tags] [-t|--template-only] [-n|--no-delete] [endpoint] DESCRIPTION
smd-push performs in the remote maildir all the changes that were performed on the local one. No changes are made on the local maildir. Use smd-pull(1) for that. Refer to smd-config(5) for the configuration file format. OPTIONS
-v --verbose Verbose output -s --show-tags Machine readable output -d --dry-run Do not perform any action for real -n --no-delete Do not propagate deletions -t --template-only Just create a template configuration file if none endpoint Is the suffix for the name of the configuration file to use. If it is omitted, the configuration file ~/.smd/config.default is used. FILES
~/.smd/config.* ~/.smd/hooks/pre-push.d/ ~/.smd/hooks/post-push.d/ SEE ALSO
mddiff(1), smd-server(1), smd-client(1), smd-pull(1), smd-loop(1), smd-config(5) AUTHOR
Enrico Tassi <gares@fettunta.org> 11 June 2012 smd-push(1)
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