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Top Forums Shell Programming and Scripting The builtin split function in AWK is too slow Post 302423706 by durden_tyler on Friday 21st of May 2010 07:45:48 PM
Old 05-21-2010
I have been going through your posts, and I don't quite understand a few things in your data files.

Quote:
Originally Posted by kevintse
...I have two data files, I want to generate the result through grouping and sorting the data in these two files.
Code:
$ cat data1.txt
A:list1,list2,list3,list4
B:list1,list2,list3,list4
C:list1,list2,list6
D:list3
F:list2,list4,list5
G:list7
H:list2,list5
A:list1,list2,list3,list4
B:list1,list2,list3,list4
C:list1,list2,list6
D:list3
F:list2,list4,list5
G:list7
H:list2,list5
 
$ cat data2.txt
list1:A,B,C
list2:A,B,C,F,H
list3:A,B,D
list4:A,B,F
list5:H,F
list6:C
list7:G
 
desired output:
A:B,C,D,F,H
B:A,C,D,F,H
C:A,B,F,H
D:A,B
F:A,B,C,H
H:A,B,C,F

I will explain a little bit for the output. For the row that starts with "A", "B,C,D,F,H" are extracted from all those lists that contain "A", and they are sorted by their appearing frequency in descending order.
...
The portion in red color is a repetition of the portion immediately above it in your file data1.txt.

(1) Can your actual file have data like that ?
(2) If yes, then can the "second" set be different ? For example, is it possible to have two lines like so -

Code:
A:list1,list2,list3,list4
...
A:list1,list3,list5

(3) If yes, then can there be more than two sets in data1.txt ? like so -

Code:
A:list1,list2,list3,list4
...
A:list1,list3,list5
...
A:list1,list5,list7

(4) Do you collect a unique set of "lists", for each character on the left, in such a case ?
For example, for A => list1, list2, list3, list4, list5, list7 ?

(5) The character "C" is associated with 3 lists in data1.txt:

Code:
C:list1,list2,list6

And these lists have the following set of characters:

Code:
list1:A,B,C
list2:A,B,C,F,H
...
list6:C
...

So, the distinct set of characters associated with list1, list2 and list6 should be => (A, B, C, F, H)

Your desired output for "C" is like so -

Code:
desired output:
...
C:A,B,F,H

Have you removed "C" from the right-hand-side list, because it is common on either side of the ":" character ?

(6) Is that also the reason you've omitted "G:G" from your desired output ?

Quote:
...
This is the code I used to generate the output:
Code:
#!/bin/awk -f
 
BEGIN { FS=":"; ts1 = "date \"+%s\""; }
NR == FNR { bookLists[$1]=$2; next }    #the first file
{ books[$1]=$2 }                                        #the second file
END {
{ print "There are in total", length(bookLists), "book lists and ", length(books), "books." > "make_data_log.txt" }
count = 0
#bookLists: A:list1,list2
#books: list1:A,B
cmd = "sort -k 3 -nr | awk ' { arr[$2]; if(!b) b=$1 } END { for (i in arr) str=str ? str\",\"i : i; print b, str} '"
for (i in bookLists) {
        #print "========== book " i "=========="
        split(bookLists[i], tmpBls, /,/)
        for (j in tmpBls) {
                split(books[tmpBls[j]], tmpBs, /,/)
                for (k in tmpBs)
                        ++result[tmpBs[k]]      #print i":", tmpBs[k]
                delete tmpBs
        }
        for (l in result) {
                if (i != l) print i, l, result[l] | cmd
                #if (i != l) print i, l, result[l]
                if (++num == 20) break
        }
        close(cmd)              #close the pipe, or this "sort" will be delayed until the awk program ends
        delete result
        delete tmpBls
        num = 0
        if (++count % 100000 == 0)
                print count >> "make_data_log.txt"
}
 
{ ts2 = "date \"+%s\""; print ts2-ts1, "seconds consumed." >> "make_data_log.txt" }
 
}

...
What's the current response time for your actual data "data1.txt" (the one that has more than 30,000 strings delimited by commas) ?

And what is the acceptable response time for the same?

tyler_durden
 

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