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Special Forums UNIX and Linux Applications High Performance Computing Installation of MPI in a cluster of SMPs Post 302415004 by Sonia_ on Wednesday 21st of April 2010 01:39:53 PM
Old 04-21-2010
Installation of MPI in a cluster of SMPs

Hi,

I've installed mpich2 v. 1.2.1p1 on a cluster of dual-processors with the default options (in previous versions I used 'ssm' device, but now I use 'nemesis').

I'd like that every time I execute a job (e.g. with 2 MPI-processes), each job's process be dispatched on a different machine (until to complete the maximum number of machines) and not on a same machine, viz :

Job A with 2 process:

Machine 1:
CPU0 Empty
CPU1 Used
Machine 2:
CPU0 Empty
CPU1 Used

but now it is scheduled as

Machine 1:
CPU0 Used
CPU1 Used
Machine 2:
CPU0 Empty
CPU1 Empty

Regards!Smilie
 

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ptsematest(8)															     ptsematest(8)

NAME
ptsematest - Start two threads and measure the latency of interprocess communication with POSIX mutex. SYNTAX
ptsematest [-a|-a PROC] [-b USEC] [-d DIST] [-i INTV] [-l loops] [-p PRIO] [-t|-t NUM] DESCRIPTION
The program ptsematest starts two threads that are synchronized via pthread_mutex_unlock()/pthread_mutex_lock() and measures the latency between releasing and getting the lock. OPTIONS
-a, --affinity[=PROC] Run on procesor number PROC. If PROC is not specified, run on current processor. -b, --breaktrace=USEC Send break trace command when latency > USEC. This is a debugging option to control the latency tracer in the realtime preemption patch. It is useful to track down unexpected large latencies of a system. -d, --distance=DIST Set the distance of thread intervals in microseconds (default is 500 us). When cylictest is called with the -t option and more than one thread is created, then this distance value is added to the interval of the threads: Interval(thread N) = Interval(thread N-1) + DIST -i, --interval=INTV Set the base interval of the thread(s) in microseconds (default is 1000 us). This sets the interval of the first thread. See also -d. -l, --loops=LOOPS Set the number of loops. The default is 0 (endless). This option is useful for automated tests with a given number of test cycles. ptsematest is stopped once the number of timer intervals has been reached. -p, --prio=PRIO Set the priority of the process. -t, --threads[=NUM] Set the number of test threads (default is 1, if this option is not given). If NUM is specified, create NUM test threads. If NUM is not specifed, NUM is set to the number of available CPUs. EXAMPLES
The following example was running on a 4-way processor: # ptsematest -a -t -p99 -i100 -d25 -l1000000 #0: ID8672, P99, CPU0, I100; #1: ID8673, P99, CPU0, Cycles 1000000 #2: ID8674, P98, CPU1, I125; #3: ID8675, P98, CPU1, Cycles 811035 #4: ID8676, P97, CPU2, I150; #5: ID8677, P97, CPU2, Cycles 668130 #6: ID8678, P96, CPU3, I175; #7: ID8679, P96, CPU3, Cycles 589423 #1 -> #0, Min 1, Cur 1, Avg 2, Max 11 #3 -> #2, Min 1, Cur 2, Avg 2, Max 13 #5 -> #4, Min 1, Cur 4, Avg 3, Max 12 #7 -> #6, Min 1, Cur 4, Avg 2, Max 12 AUTHORS
Carsten Emde <C.Emde@osadl.org> SEE ALSO
pthread_mutex_lock(3p), pthread_mutex_unlock(3p) 0.1 ptsematest(8)
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