04-02-2010
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I am looking for a way to remove any line in a text file that contains the string "Mac address". I guess you would grep and sed, but I am not sure how to do this. Thanks for you help. (3 Replies)
Discussion started by: CBarraford
3 Replies
2. UNIX for Dummies Questions & Answers
If I have a data test.txt with 1000 columns such as:
id sex gene1 gene2 gene2.dl gene3 gene4 gene4.dl .......
1 1 AA AT AT TT AT AT .......
2 1 AG TT TT TA AA AA .......
3 2 AA AT AT TT AT ... (2 Replies)
Discussion started by: AMBER
2 Replies
3. Shell Programming and Scripting
I have 5 column in sample txt file
where in i have to create report based upon 1,3 and 5 th column..
I have : in first and third coulmn. But I want to retain the colon of fifth coulmn and remove the colon of first column..
5th column contains String message (for example,... (7 Replies)
Discussion started by: Shirisha
7 Replies
4. Shell Programming and Scripting
Hello ,
i have a text file like this :
A123 c12AB c32DD aaaa
B123 23DS 12QW bbbb
C123 2GR 3RG cccccc
i want to remove the numbers from second and third column only.
i tried this :
perl -pe 's///g' file.txt > newfile.txt
but it will remove the number from... (7 Replies)
Discussion started by: shelladdict
7 Replies
5. Shell Programming and Scripting
Hi,
I need help to remove tab delimited space in the $2 of a specific row. My file is like this:-
file1.txt
No_1 4 139 156
No_1 5 161 205
No_4 91 227 212
No_19 254 243 263
No_19 645 249 258
No_19 101 2492 2635
No_90 8 277 288... (5 Replies)
Discussion started by: redse171
5 Replies
6. Shell Programming and Scripting
Hi,
I would like to ask your expertise to remove specific column no. 8 in the below file using but I don't have an idea on how to simply do this using awk command. Appreciate your help in advance.
Input f:
ABC 1 1XC
CDA 1 2YC
CCC 1 3XC
AVD 1 3XA
Expected output file:
ABC 1 1C
CDA... (9 Replies)
Discussion started by: zzavilz
9 Replies
7. Shell Programming and Scripting
Hi All, I will need an help with respect to replacing a range of columns on a non-delimited file using a particular string pattern.
Say file input is
MYNUMBERD000000-BAN CHUE INSNTS ** N+
MYAREDSDD000000+BAN CHUE INSNTS ** N+
MYDERFFFSD00000-GIR PENT - ACH ** ... (5 Replies)
Discussion started by: navojit dutta
5 Replies
8. Shell Programming and Scripting
I have an xml file dumped from rrd file, that I want to "patch" so the xml file doesn't contain any blank hole in the resulting graph of the rrd file.
Here is the file.
<!-- 2015-10-12 14:00:00 WIB / 1444633200 --> <row><v> 4.0419731265e+07 </v><v> 4.5045912770e+06... (2 Replies)
Discussion started by: rk4k
2 Replies
9. Shell Programming and Scripting
Dear group,
I have following input text file:
Brit 2016 11 18 12 00 10 1.485,00 EUR
Brit 2016 11 18 12 00 10 142,64 EUR
Brit 2016 11 18 12 00 10 19,80 EUR
Brit 2016 11 18 12 00 10 545,00 EUR
Brit 2016 11 18 12 00 10 6.450,00 EUR... (3 Replies)
Discussion started by: gfhsd
3 Replies
10. Shell Programming and Scripting
I need to remove specific column to one range
source file
3 1 000123456
2 2 000123569
3 3 000123564
12 000123156
15 000125648
128 000125648
Output required
3 000123456
2 000123569
3 000123564
12 000123156
15 000125648
128 000125648 (6 Replies)
Discussion started by: ranjancom2000
6 Replies
LEARN ABOUT DEBIAN
warptensorimagemultitransform
WARPTENSORIMAGEMULTITRANSFORM(1) User Commands WARPTENSORIMAGEMULTITRANSFORM(1)
NAME
WarpTensorImageMultiTransform - part of ANTS registration suite
DESCRIPTION
WarpImageMultiTransform ImageDimension moving_image output_image [-R reference_image | --tightest-bounding-box] (--reslice-by-header)
[--use-NN (use Nearest Neighbor Interpolator)][--ANTS-prefix prefix-name | --ANTS-prefix-invert prefix-name] {[deformation_field | [-i]
affine_transform_txt | --Id | [-i] --moving-image-header / -mh | [-i] --reference-image-header / -rh]} Example: Reslice the image: WarpIm-
ageMultiTransform 3 Imov.nii Iout.nii --tightest-bounding-box --reslice-by-header Reslice the image to a reference image: WarpImageMulti-
Transform 3 Imov.nii Iout.nii -R Iref.nii --tightest-bounding-box --reslice-by-header Note: -i will use the inversion of the following
affine transform. --tightest-bounding-box will be overrided by -R reference_image if given. It computes the tightest bounding box using
all the affine transformations. --Id uses the identity transform. --moving-image-header or -mh in short will use the orientation header
of the moving image file. This is typically not used with --reslice-by-header. --reference-image-header or -rh in short will use the ori-
entation header of the fixed image file. This is typically not used with --reslice-by-header. --reslice-by-header uses the orientation
matrix and origin encoded in the image file header. It can be used together with -R. This is typically not used together with any other
transforms. --reslice-by-header is equvalient to -i -mh, or -fh -i -mh if used together with -R.
For ANTS users: To use with the deformation field and the affine transform files generated from ANTS: --ANTS-prefix prefix-name --ANTS-pre-
fix-invert prefix-name Example: 3 moving_image output_image -R reference_image --ANTS-prefix abcd.nii.gz Applies abcdWarpxvec.nii.gz/abcd-
Warpyvec.nii.gz/abcdWarpzvec.nii.gz and then abcdAffine.txt. Use this with ANTS to get the moving_image warped into the reference_image
domain. 3 reference_image output_image -R moving_image --ANTS-prefix-invert abcd.nii.gz --ANTS-invert Applies the inversion of
abcdAffine.txt and then abcdInverseWarpxvec.nii.gz/abcdInverseWarpyvec.nii.gz/abcdInverseWarpzvec.nii.gz. Use this with ANTS to get the
reference_image warped into the moving_image domain. Note: prefix name "abcd" without any extension will use ".nii.gz" by default
WarpTensorImageMultiTransform 1.9 May 2012 WARPTENSORIMAGEMULTITRANSFORM(1)