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Full Discussion: Extract specific data and change its arrangment
Top Forums Shell Programming and Scripting Extract specific data and change its arrangment Post 302408609 by patrick87 on Tuesday 30th of March 2010 04:49:15 AM
Old 03-30-2010
Extract specific data and change its arrangment
Input:
Code:
HS04636    PROGRAM    source    836    7001        +    ID=g1
HS04636    PROGRAM    beginner    836    7001        +    ID=g1.t1;Parent=g1
HS04636    PROGRAM    position    836    836        +    Parent=g1.t1
HS04636    PROGRAM    type    836    1017        +    Parent=g1.t1
HS04636    PROGRAM    style    966    968    .        Parent=g1.t1
HS04636    PROGRAM    range    966    1017        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    range    1818    1934        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    type    1818    1934        +    Parent=g1.t1
HS04636    PROGRAM    range    2055    2198        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    type    2055    2198        +    Parent=g1.t1

HS04636    PROGRAM    source    836    7001        +    ID=g1
HS04636    PROGRAM    range    2852    2995        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    type    2852    2995        +    Parent=g1.t1
HS04636    PROGRAM    range    3426    3607        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    type    3426    3607        +    Parent=g1.t1

Desired output:
Code:
HS04636    PROGRAM    source    836    7001        +    ID=g1
HS04636    PROGRAM    type    836    1017        +    Parent=g1.t1
HS04636    PROGRAM    range    966    1017        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    type    1818    1934        +    Parent=g1.t1
HS04636    PROGRAM    range    1818    1934        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    type    2055    2198        +    Parent=g1.t1
HS04636    PROGRAM    range    2055    2198        +    ID=g1.t1.range;Parent=g1.t1

HS04636    PROGRAM    source    836    7001        +    ID=g1
HS04636    PROGRAM    type    2852    2995        +    Parent=g1.t1
HS04636    PROGRAM    range    2852    2995        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    type    3426    3607        +    Parent=g1.t1
HS04636    PROGRAM    range    3426    3607        +    ID=g1.t1.range;Parent=g1.t1

The awk code that I have try and its respectively output result which is different with my desired output result:
Code:
awk '$3~/source/||/type/||/range/{print}' input file
HS04636    PROGRAM    source    836    7001        +    ID=g1
HS04636    PROGRAM    type    836    1017        +    Parent=g1.t1
HS04636    PROGRAM    range    966    1017        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    range    1818    1934        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    type    1818    1934        +    Parent=g1.t1
HS04636    PROGRAM    range    2055    2198        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    type    2055    2198        +    Parent=g1.t1

HS04636    PROGRAM    source    836    7001        +    ID=g1
HS04636    PROGRAM    range    2852    2995        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    type    2852    2995        +    Parent=g1.t1
HS04636    PROGRAM    range    3426    3607        +    ID=g1.t1.range;Parent=g1.t1
HS04636    PROGRAM    type    3426    3607        +    Parent=g1.t1

Actually I plan to extract all the content related to "source" "range" "type" and then from the content, I plan to arrange the data follow the arrangement of one "source" attached with "type" and then "range" subsequently.
Sorry if I can't express well what I desired.
Hopefully from the desired output result shown above, anybody can guide me to archive my desired goal?
Thanks again and a lot.
 

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