to parse (or grep) a number from a datafile and write it to tab limited file
Hi All,
I have a folder that contain 100's of subfolders namely:
Note that each subfolder have a number as name.
Within each subfolder there are 3 files named associated with the subfolder name but different extensions.
What I need is to grep (parse) a data (numberical) value from the .log file and then print this value in a tab delimited file in the main folder in the following way:
Following is an example of a log file
What I need to grep is highlighted with bold font (lnL = -4436.816826)
I need to have the numerical value, -4436.816826 parsed out and printed to a file along with the first part of folder name.
Please let me know the best way to do this in sed or awk.
Hi guys, my supervisor has asked me to solve the problem in 7 days, I've taken 3 days to think about it but couldn't figure out any idea.
Please give me some thoughts with the following problem,
I have index.database that has only index date:
1994
1995
1996
1997
1998
1999
I have... (6 Replies)
Hello,
I am trying to parse a file that resembles the last three groupings into something looking like the first two lines. I've fiddled with sed and awk a bit, but can't get anything to work properly. I need them separated by some delimiter. The file is some 23,000 lines of the stuff....
... (9 Replies)
I have this text file with a very large number of columns (10,000+) and I want to move the first column to the position of the six column so that the text file looks like this:
Before cutting and pasting
ID Family Mother Father Trait Phenotype
aaa bbb ... (5 Replies)
I'm facing a strange problem, please help me out.
Here we go.
I want to count number of fields in particular file.
filename and delimiter character will be passed through parameter.
On command prompt if i type following i get 27 as output (which is correct)
cat customer.dat | head -1 | awk... (12 Replies)
Hi,
I have two files:
first input file is having 7-8 columns,
and second data file is like
I want to arrange my datafile1 in the order given in second data file, by comparing the seconddatafile with the second column of first file and print the entire line....also if any... (2 Replies)
I am fairly new to programming and trying to resolve this problem. I have the file like this.
CHROM POS REF ALT 10_sample.bam 11_sample.bam 12_sample.bam 13_sample.bam 14_sample.bam 15_sample.bam 16_sample.bam
tg93 77 T C T T T T T
tg93 79 ... (4 Replies)
I'm pretty new to Java and I am trying to write a program that will pick up a file from a windows directory adn parse through the XML file to produce a report that will show a total item count and a total paid amount. Any one have any suggestions? Trying to figure out where to start... (4 Replies)
I have a file like this.
It is tab delimited.
Unfortunately, the missing data was filled in with a period "." (see the leading lines 1-5 columns)
I want to substitute the periods for misisng data with an integer "-999".
however, I do not want the global replace to change the other periods seen... (7 Replies)
Hi there,
I would like to use awk to reformat a tab-delimited file containing three columns as follows:
Data file:
sample 1 173
sample 269 530
sample 687 733
sample 1699 1779
Desired output file:
sample 174..265, 531..686, 734..1698
I need the value... (5 Replies)
Hello, I am trying to find a solution to problem that's proving to be beyond my newbie skills. The below files comes from a genetics study. File 1 describes a position on the genome and file 2 does the same but is formatted differently and has more information. I am trying to match all lines in... (5 Replies)
Discussion started by: andmal
5 Replies
LEARN ABOUT SUNOS
rmf
RMF(1) [nmh-1.5] RMF(1)NAME
rmf - remove an nmh folder
SYNOPSIS
rmf [+folder] [-interactive | -nointeractive] [-version] [-help]
DESCRIPTION
Rmf removes all of the messages (files) within the specified (or default) folder, and then removes the folder (directory) itself.
If there are any files within the folder which are not a part of nmh, they will not be removed, and an error will be produced. If the
folder is given explicitly or the -nointeractive option is given, then the folder will be removed without confirmation. Otherwise, the
user will be asked for confirmation. If rmf can't find the current folder, for some reason, the folder to be removed defaults to `+inbox'
(unless overridden by user's profile entry "Inbox") with confirmation.
If the folder being removed is a subfolder, the parent folder will become the new current folder, and rmf will produce a message telling
the user this has happened. This provides an easy mechanism for selecting a set of messages, operating on the list, then removing the list
and returning to the current folder from which the list was extracted.
If rmf s used on a read-only folder, it will delete all the (private) sequences (i.e., "atr-seq-folder" entries) for this folder from your
context without affecting the folder itself.
Rmf irreversibly deletes messages that don't have other links, so use it with caution.
FILES
$HOME/.mh_profile The user profile
PROFILE COMPONENTS
Path: To determine the user's nmh directory
Current-Folder: To find the default current folder
Inbox: To find the default inbox
SEE ALSO rmm(1)DEFAULTS
`+folder' defaults to the current folder, usually with confirmation
`-interactive' if +folder' not given, `-nointeractive' otherwise
CONTEXT
Rmf will set the current folder to the parent folder if a subfolder is removed; or if the current folder is removed, it will make "inbox"
current. Otherwise, it doesn't change the current folder or message.
BUGS
Although intuitively one would suspect that rmf works recursively, it does not. Hence if you have a sub-folder within a folder, in order
to rmf the parent, you must first rmf each of the children.
MH.6.8 11 June 2012 RMF(1)