I want to instert Category:XXXXX into the 2. line
something like this should work, but I have somewhere the wrong sytanx. something with the linebreak goes wrong:
sed "2i\\${n}Category:$cat\n"
Sample:
Titel Blahh Blahh abllk sdhsd sjdhf
Blahh Blah Blahh
Blahh
Should look like... (2 Replies)
When script is running you only see when some of the commands are not successfull.
Is there a way to see which command are executed and to show the substitution of variables as every line is executed ? (3 Replies)
For example I have variable like below
echo $OUTPUT
/some/path/`uname -n`
when I try to use the variable OUTPUT like below
cd $OUTPUT or cd ${OUTPUT}
I am getting bad substituion error message
$ cd $OUTPUT
ksh: cd: bad substitution
$ cd ${OUTPUT}
ksh: cd: bad substitution
... (1 Reply)
Hello All,
I don't write scripts very often, and in this case I am stumped, although it may be a bug in the version of bash I have to use (it's not my system).
I want to extract a specific string snippet from a block of text (coming from a log file) that is dependent on a bunch of other... (1 Reply)
Hello people.
Part of my script:
SUBSETID=`echo $PMFILE |sed 's/pmresult_//' | sed 's/_*//'`
MAPFILE=`find /huawei/cell /huawei/nodeb /huawei/rnc -name 'mapping_$SUBSETID.txt' |grep -v backup`
Unfortunatelly variable $SUBSETID in the MAPFILE declaration will not return the... (3 Replies)
Hello all. This is my first post/question on this site.
I’m a new Systems Analyst with previous experience with BASH. Although now I'm using AIX, and I’m trying to get a feel for the Korn shell (for those of you that don’t know AIX only uses the KORN shell).
I hope I put this into the correct... (10 Replies)
Hi,
at academic level I am familiar with how variable substitution/expansion feature works. From your live experience, can you please tell what are real-time scenarios where ${variable:=} ${variable%pattern} ${variable:=word} sort of features can be used? How can we connect that dot that... (6 Replies)
Hi,
I am trying to substitute an attributes value using sed command but it is only possible to substitute the value without space.
input xml
<BillingAddress11300000 Tag="11300000" SectionID="BLA" CustAddrName="CLAUDIA LUCIA DE ALMEIDA" CustAddrStreet="AV ENGENHEIRO RICHARD" CustAddrState="RJ"... (3 Replies)
1. The problem statement, all variables and given/known data:
Hi,
I am trying to substitute an attributes value using sed command but it is only possible to substitute the value without space.
2. Relevant commands, code, scripts, algorithms:
input xml
<BillingAddress11300000... (13 Replies)
Discussion started by: Bijayan Sarkar
13 Replies
LEARN ABOUT DEBIAN
asn2xml
ASN2XML(1) NCBI Tools User's Manual ASN2XML(1)NAME
asn2xml - translate biological data from ASN.1 to XML
SYNOPSIS
asn2xml [-] [-b F] [-e] [-i filename] [-l filename] [-o filename] [-s]
DESCRIPTION
asn2xml converts an NCBI Seq-entry or Bioseq-set from ASN.1 format to an isomorphic XML representation. It differs from asn2asn -x in that
it converts packed sequence data back into human-readable ASCII text.
OPTIONS
A summary of options is included below.
- Print usage message
-b F Input asnfile in text mode
-e Input is a Seq-entry
-i filename
Read ASN.1 from filename (default is stdin)
-l filename
Log errors to filename (default is stderr)
-o filename
Write XML to filename (default is stdout)
-s Input is a Seq-submit
AUTHOR
The National Center for Biotechnology Information.
SEE ALSO asn2all(1), asn2asn(1), asn2ff(1), asn2fsa(1), asn2gb(1), asndhuff(1), gene2xml(1), /usr/share/doc/ncbi-tools-bin/README.asn2xml,
/usr/share/doc/libncbi6/ncbixml.txt.gz
NCBI 2005-05-16 ASN2XML(1)