I have tracked this problem down to a ecrypts issue.
I have a the Private ecrypts directory set up as usual except that I don't like it's automounting behaviour.
The original listing of the dir looks like:
I have renamed auto-mount to this, which prevents the auto-mounting of the ecrypts folder, which I manually mount if needed.
If have have auto-mount as the original name, then I don't have to log out twice from a vtty. When I have auto-mount renamed so that ecrypt doesn't see it, I have to log out of vtty twice. This is very highly reproducible in that it occurs EVERY time. Also of note, it doesn't really matter if the private dir is "mounted" or not, which caused me to miss this. It is just renaming that one file that breaks it like this.
Anyone have any idea as to a fix?
I'll be posting a bug report in view of this as well.
Thanks,
Narnie
---------- Post updated at 12:48 AM ---------- Previous update was at 12:31 AM ----------
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LEARN ABOUT DEBIAN
beagle_beagleimpl
beagle::BeagleImpl(3) HMSBEAGLE beagle::BeagleImpl(3)NAME
beagle::BeagleImpl -
SYNOPSIS
Inherited by beagle::cpu::BeagleCPUImpl, and beagle::gpu::BeagleGPUImpl.
Public Member Functions
virtual int createInstance (int tipCount, int partialsBufferCount, int compactBufferCount, int stateCount, int patternCount, int
eigenBufferCount, int matrixBufferCount, int categoryCount, int scaleBufferCount, int resourceNumber, long preferenceFlags, long
requirementFlags)=0
virtual int getInstanceDetails (BeagleInstanceDetails *returnInfo)=0
virtual int setTipStates (int tipIndex, const int *inStates)=0
virtual int setTipPartials (int tipIndex, const double *inPartials)=0
virtual int setPartials (int bufferIndex, const double *inPartials)=0
virtual int getPartials (int bufferIndex, int scaleIndex, double *outPartials)=0
virtual int setEigenDecomposition (int eigenIndex, const double *inEigenVectors, const double *inInverseEigenVectors, const double
*inEigenValues)=0
virtual int setStateFrequencies (int stateFrequenciesIndex, const double *inStateFrequencies)=0
virtual int setCategoryWeights (int categoryWeightsIndex, const double *inCategoryWeights)=0
virtual int setPatternWeights (const double *inPatternWeights)=0
virtual int setCategoryRates (const double *inCategoryRates)=0
virtual int setTransitionMatrix (int matrixIndex, const double *inMatrix, double paddedValue)=0
virtual int setTransitionMatrices (const int *matrixIndices, const double *inMatrices, const double *paddedValues, int count)=0
virtual int getTransitionMatrix (int matrixIndex, double *outMatrix)=0
virtual int updateTransitionMatrices (int eigenIndex, const int *probabilityIndices, const int *firstDerivativeIndices, const int
*secondDerivativeIndices, const double *edgeLengths, int count)=0
virtual int updatePartials (const int *operations, int operationCount, int cumulativeScalingIndex)=0
virtual int waitForPartials (const int *destinationPartials, int destinationPartialsCount)=0
virtual int accumulateScaleFactors (const int *scalingIndices, int count, int cumulativeScalingIndex)=0
virtual int removeScaleFactors (const int *scalingIndices, int count, int cumulativeScalingIndex)=0
virtual int resetScaleFactors (int cumulativeScalingIndex)=0
virtual int copyScaleFactors (int destScalingIndex, int srcScalingIndex)=0
virtual int calculateRootLogLikelihoods (const int *bufferIndices, const int *categoryWeightsIndices, const int *stateFrequenciesIndices,
const int *scalingFactorsIndices, int count, double *outSumLogLikelihood)=0
virtual int calculateEdgeLogLikelihoods (const int *parentBufferIndices, const int *childBufferIndices, const int *probabilityIndices,
const int *firstDerivativeIndices, const int *secondDerivativeIndices, const int *categoryWeightsIndices, const int
*stateFrequenciesIndices, const int *scalingFactorsIndices, int count, double *outSumLogLikelihood, double *outSumFirstDerivative,
double *outSumSecondDerivative)=0
virtual int getSiteLogLikelihoods (double *outLogLikelihoods)=0
virtual int getSiteDerivatives (double *outFirstDerivatives, double *outSecondDerivatives)=0
Public Attributes
int resourceNumber
Author
Generated automatically by Doxygen for HMSBEAGLE from the source code.
Version 1.0.0 Fri May 25 2012 beagle::BeagleImpl(3)