I have a large text-file with tab-delimited genetic data that looks like:
KSC112 KSC234 0 0 1 1 A G C T
I simply wan to delete the first column, but since the file has 600 000 columns, it is not possible with awk (seems to be limited at 32k columns).
Does anyone have an idea how to do this? (2 Replies)
Hello,
I am trying to parse a file that resembles the last three groupings into something looking like the first two lines. I've fiddled with sed and awk a bit, but can't get anything to work properly. I need them separated by some delimiter. The file is some 23,000 lines of the stuff....
... (9 Replies)
I want to add a new column to a tab delimited text file. It will be the first column and it will just be 1's. How do I go about doing that? Thanks! (1 Reply)
hello all,
i have an input file like that
A A X0
A B X1
A C X2
...
A Z Xx
B A X1
B B X3
....
Z A Xx
Z B X4
and i want to have an output like that
A B C D
A X0 X1 X2 Xy
B X1 X3 X4 (4 Replies)
Hi,
I have created a tab separated file from the following input file.
ADDRESS1 CITY STATE POSTAL COUNTRY LON LAT
32 PRINZREGENTENSTRASSE ROSENHEIM BAYERN 83022 DEU 1212182 4785699
263 VIA DANTE ALIGHIERI BARI PUGLIA 70122 ITA 1686233 4112154
30 VIA MILANO ... (1 Reply)
Hi,
I have a tab separated. I want to replace all the "&" in 8th column of the file with "and" .I am trying with
awk -F, -vOFS=\\t '{$8=($8=="&")?"and":$8}1' test> test1.txt
My file is abc def ghk hjk lkm hgb jkluy acvf & bhj hihuhu fgg
me mine he her go went has has & had hgf hgy
... (1 Reply)
Hi all,
I'm trying to read a tab separated file and apply some functions on each column. I have an issue with empty column.
Exemple:
$ #cat with the sed to allow you to see my tab
$ cat foo.txt| sed 's/\t/;/g'
a;1;x
b;;yI wanted to something like that:
while read col1 col2 col3
do
... (4 Replies)
I'd like to take the output of `pwsafe --exportdb > database.txt` and convert it to a KeePassX XML friendly format (feature request in pwsafe).
I found flat file converter but the syntax is beyond me with this example. Solutions are welcomed.
More details
Here is the pwsafe --> KeePassX XML... (2 Replies)
Discussion started by: graysky
2 Replies
LEARN ABOUT REDHAT
od
OD(1) FSF OD(1)NAME
od - dump files in octal and other formats
SYNOPSIS
od [OPTION]... [FILE]...
od --traditional [FILE] [[+]OFFSET [[+]LABEL]]
DESCRIPTION
Write an unambiguous representation, octal bytes by default, of FILE to standard output. With more than one FILE argument, concatenate
them in the listed order to form the input. With no FILE, or when FILE is -, read standard input.
All arguments to long options are mandatory for short options.
-A, --address-radix=RADIX
decide how file offsets are printed
-j, --skip-bytes=BYTES
skip BYTES input bytes first
-N, --read-bytes=BYTES
limit dump to BYTES input bytes
-s, --strings[=BYTES]
output strings of at least BYTES graphic chars
-t, --format=TYPE
select output format or formats
-v, --output-duplicates
do not use * to mark line suppression
-w, --width[=BYTES]
output BYTES bytes per output line
--traditional
accept arguments in traditional form
--help display this help and exit
--version
output version information and exit
Traditional format specifications may be intermixed; they accumulate:
-a same as -t a, select named characters
-b same as -t oC, select octal bytes
-c same as -t c, select ASCII characters or backslash escapes
-d same as -t u2, select unsigned decimal shorts
-f same as -t fF, select floats
-h same as -t x2, select hexadecimal shorts
-i same as -t d2, select decimal shorts
-l same as -t d4, select decimal longs
-o same as -t o2, select octal shorts
-x same as -t x2, select hexadecimal shorts
For older syntax (second call format), OFFSET means -j OFFSET. LABEL is the pseudo-address at first byte printed, incremented when dump is
progressing. For OFFSET and LABEL, a 0x or 0X prefix indicates hexadecimal, suffixes may be . for octal and b for multiply by 512.
TYPE is made up of one or more of these specifications:
a named character
c ASCII character or backslash escape
d[SIZE]
signed decimal, SIZE bytes per integer
f[SIZE]
floating point, SIZE bytes per integer
o[SIZE]
octal, SIZE bytes per integer
u[SIZE]
unsigned decimal, SIZE bytes per integer
x[SIZE]
hexadecimal, SIZE bytes per integer
SIZE is a number. For TYPE in doux, SIZE may also be C for sizeof(char), S for sizeof(short), I for sizeof(int) or L for sizeof(long). If
TYPE is f, SIZE may also be F for sizeof(float), D for sizeof(double) or L for sizeof(long double).
RADIX is d for decimal, o for octal, x for hexadecimal or n for none. BYTES is hexadecimal with 0x or 0X prefix, it is multiplied by 512
with b suffix, by 1024 with k and by 1048576 with m. Adding a z suffix to any type adds a display of printable characters to the end of
each line of output. --string without a number implies 3. --width without a number implies 32. By default, od uses -A o -t d2 -w 16.
AUTHOR
Written by Jim Meyering.
REPORTING BUGS
Report bugs to <bug-coreutils@gnu.org>.
COPYRIGHT
Copyright (C) 2002 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICU-
LAR PURPOSE.
SEE ALSO
The full documentation for od is maintained as a Texinfo manual. If the info and od programs are properly installed at your site, the com-
mand
info od
should give you access to the complete manual.
od (coreutils) 4.5.3 February 2003 OD(1)