Data between <wmqi></wmqi> is a record.
here there are 5 records. I need to do a split on 2 records(i.e create 3 files).
I learnt about csplit but unable to implement it.
Can anyone help.
---------- Post updated at 01:04 PM ---------- Previous update was at 12:07 PM ----------
Dear Friends,
please help me.
I am using csplit to split the files,
i.e.,
csplit -f filetype_ -n 3 filename '/regexpn/' {5}
which will split file "filename" into 5 subfiles
filetype_000
filetype_001
filetype_002
filetype_003
filetype_004
but if I run the csplit commad again it will... (2 Replies)
I have a large file with the first 2 characters of each line determining the type of record. type 03 being a subheader and then it will have multiple 04 records.
eg: 03,xxx,xxxx,xxxx
04,xxxxxxxxxxxxxxxxxxxxxxxxxxxx
04,xxxxxxxxxxxxxxxxxxxxxxxxxxxx
03,xxx,xxx,xxx
... (2 Replies)
I am trying to use the csplit file on a file that contains records that have more than 2048 characters on a line. The resultant split file seems to ignore the rest of the line and I lose the data.
Is there any way that csplit can handle record lengths greater than 2048?
Thanks (0 Replies)
I have an excel file with more than 65K records... Since excel does not take more than 65K records i wan to split the file and send it as two excel files... Could some help me how to use the csplit by specifiying the no of records (7 Replies)
Hi All,
I have a strange behaviour from csplit command on some text files.
I have a comma separated file and data with in double quotes. This file is being generated from Sequential stage of Data stage tool.
This file has 67 fields in each records with some null and blank in the data.... (4 Replies)
Hello all
The below command works perfeft when executed from the shell prompt.
"csplit -f first Allocation.log.1 "%. Oct 02 .%" {1} "
and generates first00 file.
But it fails if I include the same command in my script.
I am trying to automate some process and this is turning... (1 Reply)
I am using GNU csplit to extract chapters from a big file into smaller files.
I want to use the -b option
-b, --suffix-format=FORMAT use sprintf FORMAT instead of %d
but I have failed so far.
1) All the generated files need to have a suffix .txt at the end
2) They have to look like... (1 Reply)
I want to split big files based on a pattern to stdout.
Although csplit works well for me splitting the output into separate files (e.g. xx00, xx01, xx02, ...), the following is not working as expected:
<code>
# assuming pattern occurs less than 100 times
csplit bigfile '%pattern%'... (2 Replies)
Hello
am trying to split the following top output at the TTY line but having some issues:
System: msisprd Sun Oct 9 09:35:37 2011
Load averages: 0.14, 0.17, 0.16
411 processes: 361 sleeping, 50 running
Cpu states:
CPU LOAD USER NICE SYS ... (3 Replies)
Input file:
CLK00027 TESTDATA 0 S 600000 \r
0001RFC 192321 321321 321321 \r
0002 rfd this is testdata1
CLK00027 TESTDATA 0 S 600000 \r
0001RFC 192321 321321 321321 \r
0002 rfd this is testdata2
I Need to split this file into seperate files
file1.txt
CLK00027 ... (1 Reply)
Discussion started by: VXANDERB
1 Replies
LEARN ABOUT DEBIAN
obfit
obfit(1) User's Reference Manual obfit(1)NAME
obfit -- superimpose two molecules based on a pattern
SYNOPSIS
obfit SMARTS-pattern fixed-file outfile
DESCRIPTION
Superimpose two molecules using a quaternion fit. The atoms used to fit the two molecules are defined by the SMARTS pattern given by the
user. It is useful to align congeneric series of molecules on a common structural scaffold for 3D-QSAR studies. It can also be useful for
displaying the results of conformational generation.
Any molecules matching the supplied SMARTS pattern will be rotated and translated to provide the smallest possible RMSD between the matching
regions. If a molecule does not match the SMARTS pattern, it will be output with no transformation.
EXAMPLES
Align all the molecules in 'testmv.sdf' on a single molecule of 'testref.sdf' by superimposing them on its N-methylpiperidyl portion (and
outputting a new SD file to the standard output):
obfit '[nh]1c2c(=O)n(C)c(=O)n(C)c2cc1' testref.sdf testmv.sdf
SEE ALSO babel(1), obchiral(1), obfit(1), obgrep(1), obrotate(1).
The web pages for Open Babel can be found at: <http://openbabel.org/>
A guide for constructing SMARTS patterns can be found at: <http://www.daylight.com/dayhtml/doc/theory/theory.smarts.html>
AUTHORS
The obfit program was contributed by Fabien Fontaine
Open Babel is developed by a cast of many, including currrent maintainers Geoff Hutchison, Chris Morley, Michael Banck, and innumerable oth-
ers who have contributed fixes and additions. For more contributors to Open Babel, see <http://openbabel.org/wiki/THANKS>
COPYRIGHT
Copyright (C) 1998-2001 by OpenEye Scientific Software, Inc.
Some portions Copyright (C) 2001-2007 by Geoffrey R. Hutchison and other contributors.
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by
the Free Software Foundation version 2 of the License.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABIL-
ITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
Open Babel 2.2 July 4, 2008 Open Babel 2.2