i have data files in different directories like /jadat
/cadat etcc... i have list of this directories in a file files.
content of files:
ja
ca
directories:
/jadat
/cadat
file in each of these directories
natt_trans_like.dat
i need to loop though each directory for a... (1 Reply)
Hello!!
I have directories from 2008, with files in them. I want to create a script that will find the directoried from 2008 (example directory:
drwxr-xr-x 2 isplan users 1024 Nov 21 2008 FILES_112108), delete the files within those directories and then delete the directories... (3 Replies)
I want to move the files in a dir to different dirs based on their file names.
Ex: i have 4 different files with name -
CTS_NONE_10476031_MRL_PFT20081215a.txt
CTS_NONE_10633009_MRL_PFT20091020a.txt
CTS_NONE_10345673_MRL_PFT20081215a.txt
CTS_NONE_10872456_MRL_PFT20091020a.txt
and the 1st... (2 Replies)
I want to move the files in a dir to different dirs based on their file names.
Ex: i have 4 different files with name -
CTS_NONE_10476031_MRL_PFT20081215a.txt
CTS_NONE_10633009_MRL_PFT20091020a.txt
CTS_NONE_10345673_MRL_PFT20081215a.txt
CTS_NONE_10872456_MRL_PFT20091020a.txt
and the 1st... (4 Replies)
Hi
I am looking for the correct syntax to find all files in the current directory without listing sub-directoris. I was using the following command, but it still returns subdirectoris and files inside them:
$ ls -laR | grep -v ^./
Any idea? Thanks
PS I am in ksh88 (4 Replies)
Hi,
Here is what i'm trying to do,
-Check in two directories for a user inputed filename
-Then cat all the version found of the file to the current screen
I am a total nembie to programming, here what i have done so far....
#!/bin/bash
#Check in /home/loonatic and /var/named/master... (2 Replies)
I am very new to unix as well as shell scripting.
I have to write a script for the following requirement. In have to list all the files in directory and its sub directories along with file path and size of the file
Please help me in this regard and many thanks in advance. (3 Replies)
Dear Members,
I have a list of xml files like
abc.xml.table
prq.xml.table
...
..
.
in a txt file.
Now I have to search the file(s) in all directories and sub-directories and print the full path of file in a output txt file.
Please help me with the script or command to do so.
... (11 Replies)
I have searched this quite a long time but couldn't find the right method for me to use. I need to assign read write permission to the user for specific directories and it's sub directories and files. I do not want to use ACL. I do not want to assign user the same group of that directories too.... (0 Replies)
Discussion started by: blinkingdan
0 Replies
LEARN ABOUT DEBIAN
bio::search::hit::fasta
Bio::Search::Hit::Fasta(3pm) User Contributed Perl Documentation Bio::Search::Hit::Fasta(3pm)NAME
Bio::Search::Hit::Fasta - Hit object specific for Fasta-generated hits
SYNOPSIS
# You wouldn't normally create these manually;
# instead they would be produced by Bio::SearchIO::fasta
use Bio::Search::Hit::Fasta;
my $hit = Bio::Search::Hit::Fasta->new(id=>'LBL_6321', desc=>'lipoprotein', e_val=>0.01);
DESCRIPTION
Bio::Search::Hit::HitI objects are data structures that contain information about specific hits obtained during a library search. Some
information will be algorithm-specific, but others will be generally defined, such as the ability to obtain alignment objects corresponding
to each hit.
SEE ALSO
Bio::Search::Hit::HitI, Bio::Search::Hit::GenericHit, Bio::SearchIO::fasta.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably
to one of the Bioperl mailing lists. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Aaron Mackey
Email amackey-at-virginia.edu
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
_initialize
Function: where the heavy stuff will happen when new is called
AUTOLOAD
Function: Provide getter/setters for ID,DESC,SIZE,INITN,INIT1,OPT,ZSC,E_VAL
perl v5.14.2 2012-03-02 Bio::Search::Hit::Fasta(3pm)