|
|
Sponsored Content
Top Forums
Shell Programming and Scripting
Extract specific data content from a long list of data
Post 302378924 by ghostdog74 on Wednesday 9th of December 2009 05:27:07 AM
12-09-2009
|
|
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
:confused: I have a tab delimited file that I need to extract data from and into a file with specific field specs. Each field has to be a certain amount of characters. So, the name field (from delimited file) might have only 15 characters but needs to be 25 (in new file) so I need to insert spaces... (5 Replies)
Discussion started by: criddel
5 Replies
2. Shell Programming and Scripting
Hi,
I got a long list of contents:
>sequence_1
ASSSSSSSSSSSDDDDDDDDDDDCCCCCCC
ASDSFDFFDFDFFWERERERERFSDFESFSFD
>sequence_2
ASDFDFDFFDDFFDFDSFDSFDFSDFSDFDSFASDSADSADASD
ASDFFDFDFASFASFASFAFSFFSDASFASFASFAFS
>sequence_3
VEDFGSDGSDGSDGSDGSDGSDGSDG
dDFSDFSDFSDFSDFSDFSDFSDFSDF... (2 Replies)
Discussion started by: patrick87
2 Replies
3. Shell Programming and Scripting
My input:
>seq_1
DSASSTRRARRRRTPRTPSLRSRRSDVTCS
>seq_3
RMRLRRWRKSCSERS*RRSN
>seq_8
RTTGLSERPRLPTTASRSISSRWTR
>seq_10
NELPLEKGSLDSISIE
>seq_9
PNQGDAREPQAHLPRRQGPRDRPLQAYA+
QVQHRRHDHSRTQH*LCRRRQREDCDRLHR
>seq_4
DRGKGQAGCRRPQEGEALVRRCS>seq_6
FA*GLAAQDGEA*SGRG
My output: Extract all... (22 Replies)
Discussion started by: patrick87
22 Replies
4. Shell Programming and Scripting
My input file:
data_5 Ali 422 2.00E-45 102/253 140/253 24
data_3 Abu 202 60.00E-45 12/23 140/23 28
data_1 Ahmad 256 7.00E-45 120/235 140/235 22
data_4 Aman 365 8.00E-45 15/65 140/65 20
data_10 Jones 869 9.00E-45 65/253 140/253 18... (12 Replies)
Discussion started by: patrick87
12 Replies
5. Shell Programming and Scripting
Input file:
#abc_1
SAASFASFGGDSGDSGDSGSDGSDGSDGSDGSDGSDGSDGDS
Output file:
FASFGGDSGDS
I just want to print out the read from position 5 until position 15 from the data.
Below is the code that I just try but it is failed to get my desired output:
grep -v '#' input_file | awk... (5 Replies)
Discussion started by: patrick87
5 Replies
6. Shell Programming and Scripting
Input file 1:
>pattern_5
GAATTCGTTCATGTAGGTTGASDASFGDSGRTYRYGHDGSDFGSDGGDSGSDGSDFGSDF
ATTTAATTATGATTCATACGTCATATGTTATTATTCAATCGTATAAAATTATGTGACCTT
SDFSDGSDFKSDAFLKJASLFJASKLFSJAKJFHASJKFHASJKFHASJKFHSJAKFHAW
>pattern_1
AAGTCTTAAGATATCACCGTCGATTAGGTTTATACAGCTTTTGTGTTATTTAAATTTGAC... (10 Replies)
Discussion started by: patrick87
10 Replies
7. Shell Programming and Scripting
Input:
HS04636 PROGRAM source 836 7001 + ID=g1
HS04636 PROGRAM beginner 836 7001 + ID=g1.t1;Parent=g1
HS04636 PROGRAM position 836 836 + Parent=g1.t1
HS04636 PROGRAM type 836 1017 + Parent=g1.t1
HS04636 ... (2 Replies)
Discussion started by: patrick87
2 Replies
8. HP-UX
Hi Friends,
One question.
Supposed I want to extract data only for process named "sqlplus" how can I do it. Any suggestions?
I don't want all the data as it is not useful to me e.g.. Command I use is given below
extract -xp -p -r repfile -b"03/15/13 7:00 PM" -e"03/15/13 09:30 PM" -f... (1 Reply)
Discussion started by: kunwar
1 Replies
9. Shell Programming and Scripting
Bash scripting beginner here...
I have many folders, each folder representing one subject. Not all subjects have all the required files, so I need to somehow cycle through all the data and then extract the data only from subjects who have no files missing. I tried to output the ls command, but... (4 Replies)
Discussion started by: LeftoverStew
4 Replies
10. Shell Programming and Scripting
data.txt has several information like the below..
<SERVER>:WEB:MYDOM01:/tmp/cong/MYDOM01,/tmp/app/MYDOM01
<WEBER>:CANES:https-web01,https-web02:/web/apps/https-web01/config
<SERVER>:WEB:MYDOM07:/tmp/cong/MYDOM07,/tmp/app/MYDOM07... (7 Replies)
Discussion started by: mohtashims
7 Replies
LEARN ABOUT HPUX
leave
leave(1) General Commands Manual leave(1) NAME
leave - remind you when you have to leave SYNOPSIS
[hhmm] DESCRIPTION
The command waits until the specified time, then reminds you to leave. You are reminded 5 minutes and 1 minute before the actual time, at the time, and every minute thereafter. When you log off, exits. The time of day is in the form hhmm, where hh is a time in hours (which can range from 0 through 11 or 0 through 24 hours), and mm is the number of minutes after the specified hour. If the value of hh is greater than 11 (24-hour clock time), the specified value is reduced by 12 to a new value in the range of 0 through 11, thus ensuring that the alarm time is always set to activate within the next 12 hours. For example, if hhmm is 1350 and the current time is 4:00 PM (1600), the 1350 value is changed to 150 and the alarm is set for 1:50 AM, nine hours and 50 minutes later. On the other hand, if it is 9:00 AM and hhmm is specified as 2200 (10:00 PM), the value used is converted to 1000 and the alarm is set for one hour later instead of 13 hours as specified. If no argument is provided, prompts with A reply of newline causes to exit; otherwise the reply is assumed to be a time. This form is suitable for inclusion in a or file. The command ignores interrupts, quits, and terminate signals. To get rid of it you should either log off or use giving its process ID. EXAMPLES
The command sends an alarm (a beep) to your terminal to remind you that you have to leave at 12:04 and reminds you that you are late at one minute intervals after 12:04. WARNINGS
The command checks to see if a user has logged out by checking the file every 100 seconds. If a user logs out and logs back in to the same tty before makes its periodic check, may not know that the user has logged out. AUTHOR
was developed by the University of California, Berkeley. FILES
SEE ALSO
calendar(1). leave(1)