11-12-2009
Thanks a lot... It worked like a charm...
10 More Discussions You Might Find Interesting
1. UNIX for Dummies Questions & Answers
I need to extract a column from a tab delimited text file based on the string in the first row. (i.e. extract the column labeled "reaction_time"). I know that this can be done with awk by determining the column #, but I want to do it based on a search for the string b/c the column number changes... (3 Replies)
Discussion started by: t27
3 Replies
2. Shell Programming and Scripting
Hi all,
in my csv file it'll look like this, and of course it may have more columns
US to UK;abc-hq-jcl;multimedia
UK to CN;def-ny-jkl;standard
DE to DM;abc-ab-klm;critical
FD to YM;la-yr-tym;standard
HY to MC;la-yr-ytm;multimedia
GT to KJ;def-ny-jrt;critical
I would like to group... (4 Replies)
Discussion started by: tententen
4 Replies
3. Shell Programming and Scripting
Hi All,
I am newbie to Unix I ve got assignment to work in unix
can you please help me in this regard
There is a sample CSV file
"Username", "Password"
"John1", "Scot1"
"John2", "Scot2"
"John3", "Scot3"
"John4", "Scot4"
If i give the column name as Password and row number as 4 the... (3 Replies)
Discussion started by: JohnGG
3 Replies
4. UNIX for Dummies Questions & Answers
Hi everyone,
i am new to perl programming, i have a problem in extracting single column from csv file. the column is the 20th column,
please help me..
at present i use this code
#!C:/perl/bin
use warnings;
use strict;
my $file1 = $ARGV;
open FILE1, "<$file1"
or die "Can't... (13 Replies)
Discussion started by: kvth
13 Replies
5. Shell Programming and Scripting
I have a csv file that I need to extract some data from depending on another field after reading info from another text file.
The text file would say have 592560 in it.
The csv file may have some data like so
Field 1 Field2 Field3 Field4 Field5 Field6
20009756 1 ... (9 Replies)
Discussion started by: GroveTuckey
9 Replies
6. Shell Programming and Scripting
My scenario is that I need to pick value from third column based on fourth column value, if fourth column value is 1 then first value of third column.Third column (2|3|4|6|1) values are cancatenated.
Main imp point, in my .csv file, third column is having price value with comma (1,20,300), it has... (2 Replies)
Discussion started by: Ganesh L
2 Replies
7. UNIX for Dummies Questions & Answers
Hi Guys,
I am new to shell script.I need your help to write a shell script.
I need to write a shell script to extract data from a .csv file where columns are ',' separated.
The file has 5 columns having values say column 1,column 2.....column 5 as below along with their valuesm.... (1 Reply)
Discussion started by: Vivekit82
1 Replies
8. Shell Programming and Scripting
Hi,
I am having below two CSV's
col_1,col_2,col_3
1,2,4
1,3,6
col_1,col_3,col2,col_5,col_6
1,2,3,4,5
1,6,3,,,
I need to compare based on the columns where the mismatch is
expected output
col_1,col_2,col_3
1,2,4 (3 Replies)
Discussion started by: rohit_shinez
3 Replies
9. Shell Programming and Scripting
Hello everyone,
I am using ksh on Solaris 10 and I'm gathering data in a CSV file that looks like this:
20170628-23:25:01,1,0,0,1,1,1,1,55,55,1
20170628-23:30:01,1,0,0,1,1,1,1,56,56,1
20170628-23:35:00,1,0,0,1,1,2,1,57,57,2
20170628-23:40:00,1,0,0,1,1,1,1,58,58,2... (6 Replies)
Discussion started by: ejianu
6 Replies
10. UNIX for Beginners Questions & Answers
file1:
Name,Threshold,Curr Samples,Curr Error%,Curr ART
GETHome,100,21601,0.00%,47
GETregistry,100,21592,0.00%,13
GEThomeLayout,100,30466,0.00%,17
file2:
Name,Threshold,Curr Samples,Curr Error%,Curr ART
GETHome,100,21601,0.00%,33
GETregistry,100,21592,0.00%,22... (6 Replies)
Discussion started by: Raghuram717
6 Replies
LEARN ABOUT DEBIAN
csv2mipe
CSV2MIPE(1) User Contributed Perl Documentation CSV2MIPE(1)
NAME
csv2mipe.pl - Generates MIPE file based on 3 tab-delimited files
based on MIPE version v1.1
arguments: * tab-delimited file with PCR-level data
* tab-delimited file with SNP-level data
* tab-delimited file with assay-level data
Columns in file with PCR-level data:
pcr_id
pcr_modified (might be multiple, divided by semi-colon ";")
pcr_project (might be multiple, divided by semi-colon ";")
pcr_researcher (might be multiple, divided by semi-colon ";")
pcr_species
source_type
source_id
design_seq
primer1_oligo
primer1_seq
primer1_tm
primer2_oligo
primer2_seq
primer2_tm
design_remark (might be multiple, divided by semi-colon ";")
use_seq
use_revcomp
use_remark (might be multiple, divided by semi-colon ";")
pcr_remark (might be multiple, divided by semi-colon ";")
Columns in file with SNP-level data:
pcr_id
snp_id
snp_pos
snp_amb
snp_remark (might be multiple, divided by semi-colon ";")
Columns in file with assay-level data:
pcr_id
snp_id
assay_id
assay_type
assay_enzyme
assay_oligo
assay_specific
assay_tail
assay_strand
assay_remark (might be multiple, divided by semi-colon ";")
SYNOPSIS
csv2mipe.pl <pcr_file.csv> <snp_file.csv> <assay_file.csv>
ADDITIONAL INFO
See http://mipe.sourceforge.net
AUTHOR
Jan Aerts (jan.aerts@bbsrc.ac.uk)
perl v5.14.2 2005-07-20 CSV2MIPE(1)