grep for a special range Post: 302368710

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grep for a range of numbers

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I am trying to extract specific information from a large *.sam file (it's originally 28Gb). I want to extract all lines that are on chr3 somewhere in the range of 112,937,439-113,437,438. Here is a sample line from my file so you can get a feel for what each line looks like: seq.4 0 ...

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Unable to identify the special characters beyond the range of "[\x80-\xFF]"

I want to filter out the special character whose ascii value doesn't fall within the range "" . Example:� or Ć. So in that case is there any defined range which will filter out this characters. I can filter those which falls withing "" . Need to filter those special chracter which doesn't...

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zgrep

ZGREP(1)                                                      General Commands Manual                                                     ZGREP(1)

NAME

       zgrep - search possibly compressed files for a regular expression

SYNOPSIS

       zgrep [ grep_options ] [ -e ] pattern filename...

DESCRIPTION

       Zgrep  invokes  grep  on  compressed  or  gzipped  files.   These  grep  options  will  cause  zgrep  to  terminate  with  an  error  code:
       (-[drRzZ]|--di*|--exc*|--inc*|--rec*|--nu*).  All other options specified are passed directly to grep.  If no file is specified,  then  the
       standard input is decompressed if necessary and fed to grep.  Otherwise the given files are uncompressed if necessary and fed to grep.

       If the GREP environment variable is set, zgrep uses it as the grep program to be invoked.

EXIT CODE

       2 - An option that is not supported was specified.

AUTHOR

       Charles Levert (charles@comm.polymtl.ca)

SEE ALSO

       grep(1), gzexe(1), gzip(1), zdiff(1), zforce(1), zmore(1), znew(1)

                                                                                                                                          ZGREP(1)

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grep numbers range

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