Sponsored Content
Top Forums Shell Programming and Scripting Extract all the content after a specific data Post 302368525 by patrick87 on Thursday 5th of November 2009 03:39:13 AM
Old 11-05-2009
I try both the old and new version, all get the same result which print out all the things Smilie
my version is Linux ia64
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Shell script or command help to extract specific contents from a long list of content

Hi, I got a long list of contents: >sequence_1 ASSSSSSSSSSSDDDDDDDDDDDCCCCCCC ASDSFDFFDFDFFWERERERERFSDFESFSFD >sequence_2 ASDFDFDFFDDFFDFDSFDSFDFSDFSDFDSFASDSADSADASD ASDFFDFDFASFASFASFAFSFFSDASFASFASFAFS >sequence_3 VEDFGSDGSDGSDGSDGSDGSDGSDG dDFSDFSDFSDFSDFSDFSDFSDFSDF... (2 Replies)
Discussion started by: patrick87
2 Replies

2. Shell Programming and Scripting

Extract specific content from a file

My input file: >sequence_1 ASSSSSSSSSSSDDDDDDDDDDDCCCCCCC ASDSFDFFDFDFFWERERERERFSDFESFSFD >sequence_2 ASDFDFDFFDDFFDFDSFDSFDFSDFSDFDSFASDSADSADASD ASDFFDFDFASFASFASFAFSFFSDASFASFASFAFS >sequence_3 VEDFGSDGSDGSDGSDGSDGSDGSDG dDFSDFSDFSDFSDFSDFSDFSDFSDF SDGFDGSFDGSGSDGSDGSDGSDGSDG My... (22 Replies)
Discussion started by: patrick87
22 Replies

3. Shell Programming and Scripting

Extract specific data content from a long list of data

My input: Data name: ABC001 Data length: 1000 Detail info Data Direction Start_time End_time Length 1 forward 10 100 90 1 forward 15 200 185 2 reverse 50 500 450 Data name: XFG110 Data length: 100 Detail info Data Direction Start_time End_time Length 1 forward 50 100 50 ... (11 Replies)
Discussion started by: patrick87
11 Replies

4. Shell Programming and Scripting

Extract specific read from a data

Input file: #abc_1 SAASFASFGGDSGDSGDSGSDGSDGSDGSDGSDGSDGSDGDS Output file: FASFGGDSGDS I just want to print out the read from position 5 until position 15 from the data. Below is the code that I just try but it is failed to get my desired output: grep -v '#' input_file | awk... (5 Replies)
Discussion started by: patrick87
5 Replies

5. Shell Programming and Scripting

Way to extract detail and its content above specific value problem asking

Input file: >position_10 sample:68711 coords:5453-8666 number:3 type:complete len:344 MSINQYSSDFHYHSLMWQQQQQQQQHQNDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHA ERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDA NRTS* >position_4 sample:68711 coords:553-866 number:4 type:partial len:483... (7 Replies)
Discussion started by: patrick87
7 Replies

6. Shell Programming and Scripting

Extract specific content from data and rename its header problem asking

Input file 1: >pattern_5 GAATTCGTTCATGTAGGTTGASDASFGDSGRTYRYGHDGSDFGSDGGDSGSDGSDFGSDF ATTTAATTATGATTCATACGTCATATGTTATTATTCAATCGTATAAAATTATGTGACCTT SDFSDGSDFKSDAFLKJASLFJASKLFSJAKJFHASJKFHASJKFHASJKFHSJAKFHAW >pattern_1 AAGTCTTAAGATATCACCGTCGATTAGGTTTATACAGCTTTTGTGTTATTTAAATTTGAC... (10 Replies)
Discussion started by: patrick87
10 Replies

7. Shell Programming and Scripting

Extract specific data and change its arrangment

Input: HS04636 PROGRAM source 836 7001 + ID=g1 HS04636 PROGRAM beginner 836 7001 + ID=g1.t1;Parent=g1 HS04636 PROGRAM position 836 836 + Parent=g1.t1 HS04636 PROGRAM type 836 1017 + Parent=g1.t1 HS04636 ... (2 Replies)
Discussion started by: patrick87
2 Replies

8. Shell Programming and Scripting

Extract all content that match exactly only specific word

Input: 21 templeta parent 35718 36554 . - . ID=parent_cluster_50.21.11; Name=Partial%20parent%20for%20training%20set; 21 templeta kids 35718 36554 . - . ID=_52; Parent=parent_cluster_5085.21.11; 21 templeta ... (7 Replies)
Discussion started by: patrick87
7 Replies

9. Shell Programming and Scripting

How to extract specific data?

Bash scripting beginner here... I have many folders, each folder representing one subject. Not all subjects have all the required files, so I need to somehow cycle through all the data and then extract the data only from subjects who have no files missing. I tried to output the ls command, but... (4 Replies)
Discussion started by: LeftoverStew
4 Replies

10. Shell Programming and Scripting

How-To Extract specific data from a file.

data.txt has several information like the below.. <SERVER>:WEB:MYDOM01:/tmp/cong/MYDOM01,/tmp/app/MYDOM01 <WEBER>:CANES:https-web01,https-web02:/web/apps/https-web01/config <SERVER>:WEB:MYDOM07:/tmp/cong/MYDOM07,/tmp/app/MYDOM07... (7 Replies)
Discussion started by: mohtashims
7 Replies
ALLOC_HUGEPAGES(2)					     Linux Programmer's Manual						ALLOC_HUGEPAGES(2)

NAME
alloc_hugepages, free_hugepages - allocate or free huge pages SYNOPSIS
void *alloc_hugepages(int key, void *addr, size_t len, int prot, int flag); int free_hugepages(void *addr); DESCRIPTION
The system calls alloc_hugepages() and free_hugepages() were introduced in Linux 2.5.36 and removed again in 2.5.54. They existed only on i386 and ia64 (when built with CONFIG_HUGETLB_PAGE). In Linux 2.4.20, the syscall numbers exist, but the calls fail with the error ENOSYS. On i386 the memory management hardware knows about ordinary pages (4 KiB) and huge pages (2 or 4 MiB). Similarly ia64 knows about huge pages of several sizes. These system calls serve to map huge pages into the process's memory or to free them again. Huge pages are locked into memory, and are not swapped. The key argument is an identifier. When zero the pages are private, and not inherited by children. When positive the pages are shared with other applications using the same key, and inherited by child processes. The addr argument of free_hugepages() tells which page is being freed: it was the return value of a call to alloc_hugepages(). (The memory is first actually freed when all users have released it.) The addr argument of alloc_hugepages() is a hint, that the kernel may or may not follow. Addresses must be properly aligned. The len argument is the length of the required segment. It must be a multiple of the huge page size. The prot argument specifies the memory protection of the segment. It is one of PROT_READ, PROT_WRITE, PROT_EXEC. The flag argument is ignored, unless key is positive. In that case, if flag is IPC_CREAT, then a new huge page segment is created when none with the given key existed. If this flag is not set, then ENOENT is returned when no segment with the given key exists. RETURN VALUE
On success, alloc_hugepages() returns the allocated virtual address, and free_hugepages() returns zero. On error, -1 is returned, and errno is set appropriately. ERRORS
ENOSYS The system call is not supported on this kernel. FILES
/proc/sys/vm/nr_hugepages Number of configured hugetlb pages. This can be read and written. /proc/meminfo Gives info on the number of configured hugetlb pages and on their size in the three variables HugePages_Total, HugePages_Free, Hugepagesize. CONFORMING TO
These calls are specific to Linux on Intel processors, and should not be used in programs intended to be portable. NOTES
These system calls are gone; they existed only in Linux 2.5.36 through to 2.5.54. Now the hugetlbfs filesystem can be used instead. Mem- ory backed by huge pages (if the CPU supports them) is obtained by using mmap(2) to map files in this virtual filesystem. The maximal number of huge pages can be specified using the hugepages= boot parameter. COLOPHON
This page is part of release 4.15 of the Linux man-pages project. A description of the project, information about reporting bugs, and the latest version of this page, can be found at https://www.kernel.org/doc/man-pages/. Linux 2017-09-15 ALLOC_HUGEPAGES(2)
All times are GMT -4. The time now is 05:06 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy