I want to compare two files using awk and write an output based on if the records matched.
Both the files are space delimitted.
File A:
File B:
Output:
Basically, if the second column of File A matches with the second column of File B. I need to write the third column of file B and the complete line from File A.
If not matched I need to write 000 and then the complete line in File A.
I tried some awk commands.. but didnt work. This below code i wrote to get the matched record and write the third column and the file A. But the third column is not getting written.
Any help will be much appreciated.
Last edited by vgersh99; 11-02-2009 at 04:54 PM..
Reason: code tags, please!
Hi i hope some awk gurus here can help me.. here is what i need i have 2 files:
File1
152445 516532 405088.pdf
152445 516533 405089.pdf
152491 516668 405153.jpg
152491 520977 408779.jpg
152491 0 409265.pdf
File2
516532 /tmp/MainStreet_Sum09_Front_FNL.pdf
516533... (9 Replies)
Hi. I'm new to awk and have searched for a solution to my problem, but haven't found the right answer yet. I have two files that look like this:
file1
Delete,3105551234
Delete,3105551236
Delete,5625559876
Delete,5625556789
Delete,5625553456
Delete,5625551234
Delete,5625556956... (8 Replies)
Hi
How can I use awk to compare specific columns in 2 files and print the difference.
I currently have this:
BEGIN {
OFS = FS = ","
}
NR == FNR {
b = $3
next
}
{
e = ""
for (x in b) {
if (match ($1, x)) {
if (RSTART == 1 && RLENGTH > length(e)) {
e=x (2 Replies)
Hello,
I have a script which extracts the values from a csv file when a specific date is entered :
#!/bin/sh
awk 'BEGIN{printf("Entrez la date : "); getline date < "-"}
$0 ~ date {f=1;print;next}
/^{2}\//{f=0}
f' file1.csv
This script gives me a number of lines with different values.
... (6 Replies)
Hi,
I have a situation to compare one file, say file1.txt with a set of files in directory.The directory contains more than 100 files.
To be more precise, the requirement is to compare the first field of file1.txt with the first field in all the files in the directory.The files in the... (10 Replies)
Please help me to compare two files and remove the items in file2 from file1
file 1:delimited using pipe(|)
file1
00012|Description - 1|||||AA12345|1|AB12345|2|2012/06/03
AB123|Description - 2|||||AA12345|3|ZA11111|4|2012/06/04
11111|Description - 3|||||AP00012|1|AB12345|2|2012/06/03... (8 Replies)
I have a below requirement and trying to compare the files using awk
File 1 - Already stored on a prev day
id | text | email id
---------------------------------
89564|this is line 1 | xyz@sample.txt
985384|this is line 2 | abc@sample.txt
657342|this is line 3 |... (3 Replies)
HI!!
I am trying to compare two files using AWK but I have some problems. I need to count how many times letters are used in two texts. This is my script
{
long=length($0)
for (i=1;i<=long;i++)
{
aux=substr($0,i,1)
if ( aux != " " && aux != "" )
... (7 Replies)
Discussion started by: ettore8888
7 Replies
LEARN ABOUT DEBIAN
vcf-compare
VCF-COMPARE(1) User Commands VCF-COMPARE(1)NAME
vcf-compare - compare bgzipped and tabix indexed VCF files
SYNOPSIS
compare-vcf [OPTIONS] file1.vcf file2.vcf ...
DESCRIPTION
About: Compare bgzipped and tabix indexed VCF files. (E.g. bgzip file.vcf; tabix -p vcf file.vcf.gz)
OPTIONS -c, --chromosomes <list|file>
Same as -r, left for backward compatibility. Please do not use as it will be dropped in the future.
-d, --debug
Debugging information. Giving the option multiple times increases verbosity
-H, --cmp-haplotypes
Compare haplotypes, not only positions
-m, --name-mapping <list|file>
Use with -H when comparing files with differing column names. The argument to this options is a comma-separated list or one mapping
per line in a file. The names are colon separated and must appear in the same order as the files on the command line.
-R, --refseq <file>
Compare the actual sequence, not just positions. Use with -w to compare indels.
-r, --regions <list|file>
Process the given regions (comma-separated list or one region per line in a file).
-s, --samples <list>
Process only the listed samples. Excluding unwanted samples may increase performance considerably.
-w, --win <int>
In repetitive sequences, the same indel can be called at different positions. Consider records this far apart as matching (be it a
SNP or an indel).
-h, -?, --help
This help message.
vcf-compare 0.1.5 July 2011 VCF-COMPARE(1)