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Top Forums Shell Programming and Scripting Extract all the content after a specific data Post 302367250 by patrick87 on Monday 2nd of November 2009 03:31:33 AM
Old 11-02-2009
Extract all the content after a specific data

My input:
>seq_1
DSASSTRRARRRRTPRTPSLRSRRSDVTCS
>seq_3
RMRLRRWRKSCSERS*RRSN
>seq_8
RTTGLSERPRLPTTASRSISSRWTR
>seq_10
NELPLEKGSLDSISIE
>seq_9
PNQGDAREPQAHLPRRQGPRDRPLQAYA+
QVQHRRHDHSRTQH*LCRRRQREDCDRLHR
>seq_4
DRGKGQAGCRRPQEGEALVRRCS>seq_6
FA*GLAAQDGEA*SGRG

My output: Extract all the data after seq_3:
>seq_8
RTTGLSERPRLPTTASRSISSRWTR
>seq_10
NELPLEKGSLDSISIE
>seq_9
PNQGDAREPQAHLPRRQGPRDRPLQAYA+
QVQHRRHDHSRTQH*LCRRRQREDCDRLHR
>seq_4
DRGKGQAGCRRPQEGEALVRRCS>seq_6
FA*GLAAQDGEA*SGRG

Does anybody got the idea to get my desired output?
It seems like awk and sed able to do it.
But I not very sure how to solve it out.
Thanks a lot for all of your advice Smilie
 

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SPLIT(1)						      General Commands Manual							  SPLIT(1)

NAME
split - split a file into pieces SYNOPSIS
split [ option ... ] [ file ] DESCRIPTION
Split reads file (standard input by default) and writes it in pieces of 1000 lines per output file. The names of the output files are xaa, xab, and so on to xzz. The options are -n n Split into n-line pieces. -l n Synonym for -n n, a nod to Unix's syntax. -e expression File divisions occur at each line that matches a regular expression; see regexp(7). Multiple -e options may appear. If a subex- pression of expression is contained in parentheses (...), the output file name is the portion of the line which matches the subex- pression. -f stem Use stem instead of x in output file names. -s suffix Append suffix to names identified under -e. -x Exclude the matched input line from the output file. -i Ignore case in option -e; force output file names (excluding the suffix) to lower case. SOURCE
/src/cmd/split.c SEE ALSO
sed(1), awk(1), grep(1), regexp(7) SPLIT(1)
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