10-07-2009
TX5XN:/home/brad/forum/inch>ls -l
total 8
-rwxrwxrwx 1 brad root 682 2009-10-07 20:07 inch
-rw-r--r-- 1 brad root 143 2009-10-07 18:50 PF00x.shd
-rw-r--r-- 1 brad root 0 2009-10-07 19:37 PF00x.spl
-rw-r--r-- 1 brad root 0 2009-10-07 19:59 PF01x.shd
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
i have hundreds of directories that have to be renamed. the directory structure is fairly uniform which makes the scripting a little simpler.
suppose i have many directories like this */*/*/*abc* (in other words i have similar directory names 3 dirs deep that all contain the pattern abc in... (8 Replies)
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2. Shell Programming and Scripting
I am trying to use a loop to strip of the funny character ^M at the end of all lines in each file found in current directory and I have used the following in a script:
find . -type f -name '*.txt' | while read file
do
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ex - "$file" > $tempfile
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wq!
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3. UNIX for Dummies Questions & Answers
I have a number of files in directories labeled like this:
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4. Shell Programming and Scripting
Hi,
We have a file (e.g. a .csv file, but could be any other format), with 2 columns: the old value and the new value. We need to modify all the files within the current directory (including subdirectories), so find and replace the contents found in the first column within the file, with the... (9 Replies)
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5. Shell Programming and Scripting
Hi all,
I have a many folders with zipped files in them. The zipped files are txt files from different folders. The txt files have the same names. If i try to
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6. UNIX for Dummies Questions & Answers
Hi,
I have a directory with a lot of files like this:
a.bam
b.bam
c.bam
I like to rename these files based on a list where the name of the files in the first column will be replasced by the names in the second column. Here is my list which is a tab-delimited text file:
a x
b y
c ... (4 Replies)
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7. Shell Programming and Scripting
Hello, I have a text file "file.list" with the contents below.
file1
filename1
file2
filename2
file3
filename3
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8. Shell Programming and Scripting
Hey guys,
I have wrote the following script to apply a module named "trinity" on my files. (it takes two input files and spit a trinity.fasta as output)
#!/bin/bash -l
#SBATCH -p node
#SBATCH -A <projectID>
#SBATCH -n 16
#SBATCH -t 7-00:00:00
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9. UNIX for Beginners Questions & Answers
Hello!
New here although not completely new to Unix.
I wonder how I could rename files based on the data found in a simple textfile.
It goes like this:
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1 ldfgkkfjslkdfjsldkfjsf.wav
2 nndsdflksdjf.wav
3 sdflksjdf jjsdflsdfl.wav
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10. UNIX for Beginners Questions & Answers
Hello Everyone ,
Iam a newbie to shell programming and iam reaching out if anyone can help in this :-
I have two files
1) Insert.txt
2) partition_list.txt
insert.txt looks like this :-
insert into emp1 partition (partition_name)
(a1,
b2,
c4,
s6,
d8)
select
a1,
b2,
c4, (2 Replies)
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LEARN ABOUT CENTOS
shell-quote
SHELL-QUOTE(1) User Contributed Perl Documentation SHELL-QUOTE(1)
NAME
shell-quote - quote arguments for safe use, unmodified in a shell command
SYNOPSIS
shell-quote [switch]... arg...
DESCRIPTION
shell-quote lets you pass arbitrary strings through the shell so that they won't be changed by the shell. This lets you process commands
or files with embedded white space or shell globbing characters safely. Here are a few examples.
EXAMPLES
ssh preserving args
When running a remote command with ssh, ssh doesn't preserve the separate arguments it receives. It just joins them with spaces and
passes them to "$SHELL -c". This doesn't work as intended:
ssh host touch 'hi there' # fails
It creates 2 files, hi and there. Instead, do this:
cmd=`shell-quote touch 'hi there'`
ssh host "$cmd"
This gives you just 1 file, hi there.
process find output
It's not ordinarily possible to process an arbitrary list of files output by find with a shell script. Anything you put in $IFS to
split up the output could legitimately be in a file's name. Here's how you can do it using shell-quote:
eval set -- `find -type f -print0 | xargs -0 shell-quote --`
debug shell scripts
shell-quote is better than echo for debugging shell scripts.
debug() {
[ -z "$debug" ] || shell-quote "debug:" "$@"
}
With echo you can't tell the difference between "debug 'foo bar'" and "debug foo bar", but with shell-quote you can.
save a command for later
shell-quote can be used to build up a shell command to run later. Say you want the user to be able to give you switches for a command
you're going to run. If you don't want the switches to be re-evaluated by the shell (which is usually a good idea, else there are
things the user can't pass through), you can do something like this:
user_switches=
while [ $# != 0 ]
do
case x$1 in
x--pass-through)
[ $# -gt 1 ] || die "need an argument for $1"
user_switches="$user_switches "`shell-quote -- "$2"`
shift;;
# process other switches
esac
shift
done
# later
eval "shell-quote some-command $user_switches my args"
OPTIONS
--debug
Turn debugging on.
--help
Show the usage message and die.
--version
Show the version number and exit.
AVAILABILITY
The code is licensed under the GNU GPL. Check http://www.argon.org/~roderick/ or CPAN for updated versions.
AUTHOR
Roderick Schertler <roderick@argon.org>
perl v5.16.3 2010-06-11 SHELL-QUOTE(1)