09-09-2009
Something like this would probably be better done with perl, as you can put the whole matrix in memory.
If you still want to use a shell script, here is one. By the way, I think you meant a symmetric matrix, and not a diagonal matrix.
#!/bin/bash
PATH=/usr/bin:/bin
export PATH
# length of each number in the matrix
rlen=5
# Right-justify the matrix
awk '{ if (ne == "") { ne = NF; } indent = (NR - 1) * (rlen + 1); printf("%" indent "s", ""); print }' rlen="$rlen" > temp.$$
# Fill in the missing parts
cat -n temp.$$ | while read line; do
set -- $line
# Get the row number
n="$1"
# Discard the row number and the 1.000 value
shift 2
# Calculate the start and end positions of the column
# If you're using Bourne shell, you'll have to use expr or similiar.
s=$(( ( $n -1 ) * ( $rlen + 1 ) + 1 ))
e=$(( $s + $rlen - 1 ))
# Get the values of the column for the preceding rows in the matrix
head -$n temp.$$ | cut -c$s-$e | tr '\n' ' '
# Output the rest of the row from the input
echo $*
done
# Clean up
rm -f temp.$$
9 More Discussions You Might Find Interesting
1. Programming
Can anyone tell me what the following statements do?
float (*tab);
tab=(float (*)) calloc(MAXCLASS,
(MAXCLASS+1)*sizeof(float)); (3 Replies)
Discussion started by: littleboyblu
3 Replies
2. Shell Programming and Scripting
Hi All
I would like to merge multiple files with the same row and column size into a matrix format
In a folder I have multiple files in the following format
vi 12.txt
a 1
b 5
c 7
d 0
vi 45.txt
a 3
b 6
c 9
d 2
vi 9.txt
a 4 (7 Replies)
Discussion started by: Lucky Ali
7 Replies
3. Ubuntu
Hi all,
Is there a way to convert full data matrix to linearised left data matrix?
e.g full data matrix
Bh1 Bh2 Bh3 Bh4 Bh5 Bh6 Bh7
Bh1 0 0.241058 0.236129 0.244397 0.237479 0.240767 0.245245
Bh2 0.241058 0 0.240594 0.241931 0.241975 ... (8 Replies)
Discussion started by: evoll
8 Replies
4. Shell Programming and Scripting
Hi everyone
I am very new at awk but think that that might be the best strategy for this. I have a matrix very similar to a correlation matrix and in practical terms I need to convert it into a list containing the values from the matrix (one value per line) with the first field of the line (row... (5 Replies)
Discussion started by: stonemonkey
5 Replies
5. Shell Programming and Scripting
Hi,
I have a table in the format:
1 0 -1 1 0
2 0 1 -1 0 0 0
3 0 1 1 0 0 0 0 0 0
etc.
I am trying to input this to a program, however it is complaining about the fact that it is not in matrix format. How do I add 0's to end of the rows to make them even?
Thanks in advance! (2 Replies)
Discussion started by: Rhavin
2 Replies
6. Shell Programming and Scripting
Hello all,
I am quite new in this but I need some help to keep going with my analysis.
I am struggling with a short script to read a square matrix and convert it in two collumns.
A B C D
A 0.00 0.06 0.51 0.03
B 0.06 0.00 0.72 0.48
C 0.51 0.72 0.00 ... (7 Replies)
Discussion started by: EvaAM
7 Replies
7. Shell Programming and Scripting
Hi Experts,
I want to print this charts diagonal data into straight lines.
This is a matrix 24X24 Horizontal and vertical.
- I want to print all the diagonal cutting characters into straight line:
Data:
E F S S A H A L L A T M C N O T S O B O D U Q H
I W I B N L O C N I L N L A N S I N... (9 Replies)
Discussion started by: rveri
9 Replies
8. Shell Programming and Scripting
Hello friends,
A big question for the UNIX INTELLIGENCE
I have a CSV file as follows:
VALUE,USER1,relatedUSER1,relatedUSER2
-1,userA,userB,userC
1,userN,userD,userB
0,userF,userH,userG
0,userT,userH,userB
1,userN,userB,userA
-1,userA,userF,userC
0,userF,userH,userG... (15 Replies)
Discussion started by: kraterions
15 Replies
9. UNIX for Beginners Questions & Answers
I have two files. Row id in File1 matches the column id in file2 (starting from column7 )except the last 2 characters. File1 has 50 rows and File 2 has 56 columns. If the id matches I want to multiply the value in column3 of File1 to the entire column in File2. and in the final output print only... (11 Replies)
Discussion started by: Akang
11 Replies
LEARN ABOUT REDHAT
chptrf
CHPTRF(l) ) CHPTRF(l)
NAME
CHPTRF - compute the factorization of a complex Hermitian packed matrix A using the Bunch-Kaufman diagonal pivoting method
SYNOPSIS
SUBROUTINE CHPTRF( UPLO, N, AP, IPIV, INFO )
CHARACTER UPLO
INTEGER INFO, N
INTEGER IPIV( * )
COMPLEX AP( * )
PURPOSE
CHPTRF computes the factorization of a complex Hermitian packed matrix A using the Bunch-Kaufman diagonal pivoting method:
A = U*D*U**H or A = L*D*L**H
where U (or L) is a product of permutation and unit upper (lower) triangular matrices, and D is Hermitian and block diagonal with 1-by-1
and 2-by-2 diagonal blocks.
ARGUMENTS
UPLO (input) CHARACTER*1
= 'U': Upper triangle of A is stored;
= 'L': Lower triangle of A is stored.
N (input) INTEGER
The order of the matrix A. N >= 0.
AP (input/output) COMPLEX array, dimension (N*(N+1)/2)
On entry, the upper or lower triangle of the Hermitian matrix A, packed columnwise in a linear array. The j-th column of A is
stored in the array AP as follows: if UPLO = 'U', AP(i + (j-1)*j/2) = A(i,j) for 1<=i<=j; if UPLO = 'L', AP(i + (j-1)*(2n-j)/2) =
A(i,j) for j<=i<=n.
On exit, the block diagonal matrix D and the multipliers used to obtain the factor U or L, stored as a packed triangular matrix
overwriting A (see below for further details).
IPIV (output) INTEGER array, dimension (N)
Details of the interchanges and the block structure of D. If IPIV(k) > 0, then rows and columns k and IPIV(k) were interchanged
and D(k,k) is a 1-by-1 diagonal block. If UPLO = 'U' and IPIV(k) = IPIV(k-1) < 0, then rows and columns k-1 and -IPIV(k) were
interchanged and D(k-1:k,k-1:k) is a 2-by-2 diagonal block. If UPLO = 'L' and IPIV(k) = IPIV(k+1) < 0, then rows and columns k+1
and -IPIV(k) were interchanged and D(k:k+1,k:k+1) is a 2-by-2 diagonal block.
INFO (output) INTEGER
= 0: successful exit
< 0: if INFO = -i, the i-th argument had an illegal value
> 0: if INFO = i, D(i,i) is exactly zero. The factorization has been completed, but the block diagonal matrix D is exactly singu-
lar, and division by zero will occur if it is used to solve a system of equations.
FURTHER DETAILS
5-96 - Based on modifications by J. Lewis, Boeing Computer Services
Company
If UPLO = 'U', then A = U*D*U', where
U = P(n)*U(n)* ... *P(k)U(k)* ...,
i.e., U is a product of terms P(k)*U(k), where k decreases from n to 1 in steps of 1 or 2, and D is a block diagonal matrix with 1-by-1 and
2-by-2 diagonal blocks D(k). P(k) is a permutation matrix as defined by IPIV(k), and U(k) is a unit upper triangular matrix, such that if
the diagonal block D(k) is of order s (s = 1 or 2), then
( I v 0 ) k-s
U(k) = ( 0 I 0 ) s
( 0 0 I ) n-k
k-s s n-k
If s = 1, D(k) overwrites A(k,k), and v overwrites A(1:k-1,k). If s = 2, the upper triangle of D(k) overwrites A(k-1,k-1), A(k-1,k), and
A(k,k), and v overwrites A(1:k-2,k-1:k).
If UPLO = 'L', then A = L*D*L', where
L = P(1)*L(1)* ... *P(k)*L(k)* ...,
i.e., L is a product of terms P(k)*L(k), where k increases from 1 to n in steps of 1 or 2, and D is a block diagonal matrix with 1-by-1 and
2-by-2 diagonal blocks D(k). P(k) is a permutation matrix as defined by IPIV(k), and L(k) is a unit lower triangular matrix, such that if
the diagonal block D(k) is of order s (s = 1 or 2), then
( I 0 0 ) k-1
L(k) = ( 0 I 0 ) s
( 0 v I ) n-k-s+1
k-1 s n-k-s+1
If s = 1, D(k) overwrites A(k,k), and v overwrites A(k+1:n,k). If s = 2, the lower triangle of D(k) overwrites A(k,k), A(k+1,k), and
A(k+1,k+1), and v overwrites A(k+2:n,k:k+1).
LAPACK version 3.0 15 June 2000 CHPTRF(l)