I have to compare two text files, very few of the lines in these files will have some difference in some column.
The files size is in GB.
Sample lines are as below:
11111122222222333333aaaaaaaaaabbbbbbbbbccccccccdddddd
11111122222222333333aaaaaaaaaabbbbbbbbbccccccccddeddd
So assuming these... (19 Replies)
Hello all,
Can anyone help me with this.
There are two files and I have to match the second file records with that of first and if matched, print the output in two fies, one containing the matched records and other containing the rest.
Here is the example.
File1
"111",erter,"00000", ... (4 Replies)
hi
I have 2 files to comapre ,in file a sible column it is numbers,in file b2 numbers and other values with coma separated.
i want compare numbers in file a with file b,and the out put put should be in C with numbers in both file a and b along with other columns of file b.
i used folowing... (7 Replies)
I have two text files which have records of thousand rows. Each row is having around 40 columns. Each column is tab delimited. Each row is delimited by newline character.
My requirement is to find for each row i need to find whether any column is different between the two files. For each row i... (8 Replies)
now i have a different file zoo.txt with content
123|zoo
234|natan
456|don
and file rick.txt with contents
123|dog|pie|pep
123|tail|see|newt
456|som|sin|sim
234|pay|rat|cat
i want to look for lines in file zoo.txt column1 that has same corresponding lines in column 1 of... (6 Replies)
Hi all,
i have two .csv files. i need to compare those two files and if there is any difference that should be moved into third .csv file.
example,
org.csv and dup.csv
when we compare those two files org.csv and dup.csv. if there is any change in dup.csv. it should be capture in third... (7 Replies)
Hello, I am trying to compare 2 files and get only the new lines as output. Note that new lines can be anywhere in the file and not necessarily at the bottom of the file.
I have made the following progress so far.
/home/aa>cat old.txt
0001 732 A
0002 732 C
0005 732 D... (7 Replies)
Dear All,
I would really appreciate if you can help me to resolve this file comparison
I have two files:
file1:
chr start end ID gene_name
chr1 2020 3030 1 test1
chr1 900 5000 2 test1
chr2 5000 8000 3 test2
chr3 6000 12000 4 test3
chr3 6000 15000 5 test3
file2:... (2 Replies)
HI,
I have two files and contains many Fields with | (pipe) delimitor, wanted to compare both the files and get only unmatched perticular fields. this i wanted to use in shell scriting.
ex:
first.txt
111 |abc| 230| hbc231 |bbb |210 |bbd405 |ghc |555 |cgv
second.txt
111 |abc |230 |hbc231... (1 Reply)
Discussion started by: prawinmca
1 Replies
LEARN ABOUT DEBIAN
csv2mipe
CSV2MIPE(1) User Contributed Perl Documentation CSV2MIPE(1)NAME
csv2mipe.pl - Generates MIPE file based on 3 tab-delimited files
based on MIPE version v1.1
arguments: * tab-delimited file with PCR-level data
* tab-delimited file with SNP-level data
* tab-delimited file with assay-level data
Columns in file with PCR-level data:
pcr_id
pcr_modified (might be multiple, divided by semi-colon ";")
pcr_project (might be multiple, divided by semi-colon ";")
pcr_researcher (might be multiple, divided by semi-colon ";")
pcr_species
source_type
source_id
design_seq
primer1_oligo
primer1_seq
primer1_tm
primer2_oligo
primer2_seq
primer2_tm
design_remark (might be multiple, divided by semi-colon ";")
use_seq
use_revcomp
use_remark (might be multiple, divided by semi-colon ";")
pcr_remark (might be multiple, divided by semi-colon ";")
Columns in file with SNP-level data:
pcr_id
snp_id
snp_pos
snp_amb
snp_remark (might be multiple, divided by semi-colon ";")
Columns in file with assay-level data:
pcr_id
snp_id
assay_id
assay_type
assay_enzyme
assay_oligo
assay_specific
assay_tail
assay_strand
assay_remark (might be multiple, divided by semi-colon ";")
SYNOPSIS
csv2mipe.pl <pcr_file.csv> <snp_file.csv> <assay_file.csv>
ADDITIONAL INFO
See http://mipe.sourceforge.net
AUTHOR
Jan Aerts (jan.aerts@bbsrc.ac.uk)
perl v5.14.2 2005-07-20 CSV2MIPE(1)