08-12-2009
H mac4rfree,
Thanks for replying. It is working....
If i have input in my csv file like this
This is," ""a"" test,"" file","for ""validation"" puropse"
Actually the above is 3 fields with value
1) This is
2) "a" test," file
3) for "validation" puropse
If data content contains comma, then csv encloses those fields with double quotes...also in cases..field itself contains double contains...
So, for the input
This is," ""a"" test,"" file","for ""validation"" puropse"
Output should be:
1) This is
2) "a" test," file
3) for "validation" puropse
I hope this example is clear. Please let me know if you need more clarity then i can provide you more details.
Thanks
Venkat
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hello!!
I have the text file with following format...
--SubTotal-----------------------------------0--161---------------44---13739369-67---
--SubTotal-----------------------------------0--147---------------0----49643---1----... (2 Replies)
Discussion started by: Danish Shakil
2 Replies
2. Shell Programming and Scripting
Hi,
In ksh, I have a file with similar rows as follows:
Department = 1234 G/L Asset Acct No = 12.0000. 2/29/2008
Department = 1234 G/L Asset Acct No = 13.0000. 3/29/2008.
I want to create a new text file that contains only the numbers and date:
1234 12.0000. 2/29/2008
1234 13.0000. ... (16 Replies)
Discussion started by: ihot
16 Replies
3. Shell Programming and Scripting
I have huge fixed width, text file in unix box and I need to extract columns found between the width 105 and 200 and output it to a new file.
Can anyone tell me how to extract it?
Thanks for your help. (1 Reply)
Discussion started by: kiran2k
1 Replies
4. Shell Programming and Scripting
Hi All,
I have 2 issues while working with file.
1. I have 2 delimited(~) files. I want to extract column numbner 3 from file1 and column number 8 from file2 and paste it into file3. I have tried using cut, but not able to get answer.
2. i have 2 filxed-width file. I wanted to do same... (1 Reply)
Discussion started by: Amit.Sagpariya
1 Replies
5. Shell Programming and Scripting
Hi experts,Please help me for the below requirement.i have a source file.(lets say contains 50 columns). I am extarcting five columns from the source file by using pattern file.for exampleinput file:--------a,b,c,d,"a,g","v b",s,koutputfile=======a,"a,g","v b",s,kThanks in advancesubhendu (1 Reply)
Discussion started by: subhendu81
1 Replies
6. Shell Programming and Scripting
Hi
I have a file of the form
name1,lastname1,email1@gmail.com,9.08243E+12,team1,role1,username1,password1
name2,lastname2,email2@gmail.com,9.08243E+11,team2,role2,username2,password2
I need to extract the email (column 3) and send a mail to each person, with their details ( specifically... (3 Replies)
Discussion started by: pkabali
3 Replies
7. Shell Programming and Scripting
hello,
i have publicly available txt file with little less than 300000 rows. i want to extract from column 1 to column 218 and save it in another text file. i use the cut command but the file is saved with multiple rows from the source file onto a single row in the destination. basically it is... (6 Replies)
Discussion started by: madrazzii
6 Replies
8. UNIX for Dummies Questions & Answers
Dear all,
I want to extract around 300 columns from a very large file with almost 2million columns. There are no headers, but I can find out which column numbers I want. I know I can extract with the function 'cut -f2' for example just the second column but how do I do this for such a large... (1 Reply)
Discussion started by: fndijk
1 Replies
9. Shell Programming and Scripting
I have a comma delimited file as per the one below and I am currently extracting the values in 2 columns (COL1 & COL6) to produce a smaller trimmed down version of the file which only contains the columns we need;
COL1,COL2,COL3,COL4,COL5,COL6,COL7,COL8,COL9... (1 Reply)
Discussion started by: Ads89
1 Replies
10. Shell Programming and Scripting
Kindly help merging information from two files with the following data structure.
I want to match for the CHR-SNP in Foo and get the columns that match from CHROM-rsID
Fields 1 & 2 of foo may have duplicates, however, a joint key of Fields $1$2$3$4 is unique.
Also would be helpful to clean up... (4 Replies)
Discussion started by: genehunter
4 Replies
LEARN ABOUT DEBIAN
csv2mipe
CSV2MIPE(1) User Contributed Perl Documentation CSV2MIPE(1)
NAME
csv2mipe.pl - Generates MIPE file based on 3 tab-delimited files
based on MIPE version v1.1
arguments: * tab-delimited file with PCR-level data
* tab-delimited file with SNP-level data
* tab-delimited file with assay-level data
Columns in file with PCR-level data:
pcr_id
pcr_modified (might be multiple, divided by semi-colon ";")
pcr_project (might be multiple, divided by semi-colon ";")
pcr_researcher (might be multiple, divided by semi-colon ";")
pcr_species
source_type
source_id
design_seq
primer1_oligo
primer1_seq
primer1_tm
primer2_oligo
primer2_seq
primer2_tm
design_remark (might be multiple, divided by semi-colon ";")
use_seq
use_revcomp
use_remark (might be multiple, divided by semi-colon ";")
pcr_remark (might be multiple, divided by semi-colon ";")
Columns in file with SNP-level data:
pcr_id
snp_id
snp_pos
snp_amb
snp_remark (might be multiple, divided by semi-colon ";")
Columns in file with assay-level data:
pcr_id
snp_id
assay_id
assay_type
assay_enzyme
assay_oligo
assay_specific
assay_tail
assay_strand
assay_remark (might be multiple, divided by semi-colon ";")
SYNOPSIS
csv2mipe.pl <pcr_file.csv> <snp_file.csv> <assay_file.csv>
ADDITIONAL INFO
See http://mipe.sourceforge.net
AUTHOR
Jan Aerts (jan.aerts@bbsrc.ac.uk)
perl v5.14.2 2005-07-20 CSV2MIPE(1)