Hiiii Friends
I have 2 files with huge data. I want to compare this 2 files & if they hav same set of vales in specific rows & columns i need to get that value from one file & replace it in other.
For example: I have few set data of both files here:
a.dat:
PDE-W 2009 12 16 5 29 11.11 ... (10 Replies)
Friends,
i have two huge complex files (for eg :A & B)as output ,
the sample contents of the files are as follows :
A
==
ID,DATE,SUM1,SUM2,TOTAL(SUM1+2)
A5066,20/04/2010,25000,50000,75000
A5049,20/04/2010,25000,60000,85000
B
==
ID,DATE,SUM1,SUM2,TOTAL(SUM1+2)... (2 Replies)
Hi forumers,
How is it going. Ok i need some advice on the following problem.
I have 2 files to read and compare data.FileA and FileB. FileA will return either status 1 or 0. FileB on the other hand is trickier and has the following details:-
Count DeviceID CurrentStatus ... (7 Replies)
Hi
May i ask if someone know a package that will search a directory recursively and compare determine duplicate files according to each filename, date modified or any attributes that will determine its duplicity
If none where should i start or what are those command in shell scripting that... (11 Replies)
I have two csv files having 90K records each & each row has around 50 columns.Lets say the file names are FILE1 and FILE2. I have to compare both the files and generate a new file that has rows from FILE2 if it differs.
FILE1
-----
2001,"John",25,19901130,21211.41,Unix Forum... (3 Replies)
Hi All,
I have a 2 path, one with oldfile path in which has several sub folders,each sub folders contains a config file(basically text file), likewise there will be another newfile path which will have sub folders, each sub folders contains a config file.
Need to read files from oldfile... (6 Replies)
I want to make a script to compare list of files in terms of its size on local & remote server whose names are same & this is required over ssh. How can I accomplish this.
Any help would be appreciated. (1 Reply)
Discussion started by: m_raheelahmed
1 Replies
LEARN ABOUT DEBIAN
vcf-compare
VCF-COMPARE(1) User Commands VCF-COMPARE(1)NAME
vcf-compare - compare bgzipped and tabix indexed VCF files
SYNOPSIS
compare-vcf [OPTIONS] file1.vcf file2.vcf ...
DESCRIPTION
About: Compare bgzipped and tabix indexed VCF files. (E.g. bgzip file.vcf; tabix -p vcf file.vcf.gz)
OPTIONS -c, --chromosomes <list|file>
Same as -r, left for backward compatibility. Please do not use as it will be dropped in the future.
-d, --debug
Debugging information. Giving the option multiple times increases verbosity
-H, --cmp-haplotypes
Compare haplotypes, not only positions
-m, --name-mapping <list|file>
Use with -H when comparing files with differing column names. The argument to this options is a comma-separated list or one mapping
per line in a file. The names are colon separated and must appear in the same order as the files on the command line.
-R, --refseq <file>
Compare the actual sequence, not just positions. Use with -w to compare indels.
-r, --regions <list|file>
Process the given regions (comma-separated list or one region per line in a file).
-s, --samples <list>
Process only the listed samples. Excluding unwanted samples may increase performance considerably.
-w, --win <int>
In repetitive sequences, the same indel can be called at different positions. Consider records this far apart as matching (be it a
SNP or an indel).
-h, -?, --help
This help message.
vcf-compare 0.1.5 July 2011 VCF-COMPARE(1)