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Shell Programming and Scripting
compare 2 arrays in perl
Post 302341354 by karla on Wednesday 5th of August 2009 04:23:19 PM
08-05-2009
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Hi there all,
I am having a question.
Is it posible to compare elements of 2 different arrays?
For example I got
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123_abc | 123_bcd
123_bcd | 234_bcd
234_abc | 567_abc
234_bcd | 123_abc
than the match is
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Hello,
Let's say that we have the two following arrays
@array1=
@array2=
Is there any easy way to compare these two arrays and print the values that exist in array1 and not in array2 and the values that exist in array2 and not in array1?
Regards,
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LEARN ABOUT DEBIAN
vcf-compare
VCF-COMPARE(1) User Commands VCF-COMPARE(1) NAME
vcf-compare - compare bgzipped and tabix indexed VCF files SYNOPSIS
compare-vcf [OPTIONS] file1.vcf file2.vcf ... DESCRIPTION
About: Compare bgzipped and tabix indexed VCF files. (E.g. bgzip file.vcf; tabix -p vcf file.vcf.gz) OPTIONS
-c, --chromosomes <list|file> Same as -r, left for backward compatibility. Please do not use as it will be dropped in the future. -d, --debug Debugging information. Giving the option multiple times increases verbosity -H, --cmp-haplotypes Compare haplotypes, not only positions -m, --name-mapping <list|file> Use with -H when comparing files with differing column names. The argument to this options is a comma-separated list or one mapping per line in a file. The names are colon separated and must appear in the same order as the files on the command line. -R, --refseq <file> Compare the actual sequence, not just positions. Use with -w to compare indels. -r, --regions <list|file> Process the given regions (comma-separated list or one region per line in a file). -s, --samples <list> Process only the listed samples. Excluding unwanted samples may increase performance considerably. -w, --win <int> In repetitive sequences, the same indel can be called at different positions. Consider records this far apart as matching (be it a SNP or an indel). -h, -?, --help This help message. vcf-compare 0.1.5 July 2011 VCF-COMPARE(1)