hiiiii
$ grep ^"#" $file
Will give the lines , which starts with # .And I wanna get the lines which are not starting with #.
How to implement that.
Thanking you
Krish:b: (10 Replies)
hey :)
if i have a variable that is
example=lewisdenny(copywrite symbol)
so its not a nomal letter but a symbol, how can i remove everything in the varible that isnt letter or number thanks :)
and as a side little question do you know how to remove .zip from a file like if i
ls... (7 Replies)
Hi,
I'm trying to acheive the following, I have a dat file in which i have several addresses, If the address starts with a single digit then i have to delete the line,
if it starts with 2 or more digits then i have to keep the line
Here is a sample of my file:
377 CARRER DE LA... (5 Replies)
Hi Guys,
I have an awk script that would search the input file for line that starts with a number 3 and copies into a new text file.
I want to extend this script to find the lines that either starts with 3 or a or b and copy all those lines into the new file.
Here is what I have so far:... (1 Reply)
Hi, I have one file, I need to check if file exist or not and then remove the lines which starts with ?
My file1.out data is some thing
abcabcppp
xyzxyzpqr
?????????
?????????
Output should be in test.out
abcabcppp
xyzxyzpqr
I am getting the output as below but the File does not exist... (4 Replies)
I have a word file that looks like:
pens
binder
spiral
user
I want to delete all the words without the letter /s/, so output looks like:
pens
spiral
user
I tried using sed:
sed '//d' infile.txt > out.txt (5 Replies)
I have requirement in my every files starting lines have # needs to be not processing or exclude the that lines.
I have written a code like below, but now working as expected getting ERROR" line 60:
1 #!/bin/sh
2 echo ======= LogManageri start ==========
3
4 #This directory is... (1 Reply)
I have a file like below
#Fields section bald
1234 2345 456 222
abcs dddd dddd ssss
mmmm mmm mmm
i need do not process a files stating with #
I was written code below
while read -r line
do
if
then
echo ${line} >>
elif
then
... (3 Replies)
This is on a CentOS box, I have two scripts that need to run in order.
I want to write a shell script that calls the first script, lets it run and then terminates it after a certain number of hours (that I specify of course), and then calls the second script (they can't run simultaneously) which... (3 Replies)
Discussion started by: btramer
3 Replies
LEARN ABOUT DEBIAN
bio::updateableseqi
Bio::UpdateableSeqI(3pm) User Contributed Perl Documentation Bio::UpdateableSeqI(3pm)NAME
Bio::UpdateableSeqI - Descendant of Bio::SeqI that allows updates
SYNOPSIS
See Bio::SeqI for most of the documentation. See the documentation of the methods for further details.
DESCRIPTION
Bio::UpdateableSeqI is an interface for Sequence objects which are expected to allow users to perform basic editing functions
(update/delete) on their component SeqFeatures.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - David Block
Email dblock@gene.pbi.nrc.ca
CONTRIBUTORS
Ewan Birney forced me to this...
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
delete_feature
Title : delete_feature
Usage : my $orphanlist=$self->delete_feature($feature,$transcript,$gene);
Function: deletes the specified $feature from the given transcript, if $transcript is sent and exists and $feature is a feature of $transcript,
or from $gene if the $feature is a feature of $gene, or from $self if $transcript and $gene are not sent. Keeps track of the features
of the $gene object that may be left as orphans and returns them as a listref.
Example : I want to delete transcript 'abc' of gene 'def', with three exons, leaving only transcript 'ghi' with two exons.
This will leave exons 1 and 3 part of 'ghi', but exon 2 will become an orphan.
my $orphanlist=$seq->delete_feature($transcript{'abc'},undef,$gene{'def'});
$orphanlist is a reference to a list containing $exon{'2'};
Returns : a listref of orphaned features after the deletion of $feature (optional)
Args : $feature - the feature to be deleted
$transcript - the transcript containing the $feature, so that a $feature can be removed from only one transcript when there are multiple
transcripts in a gene.
$gene - the gene containing the $transcript and/or the $feature
perl v5.14.2 2012-03-02 Bio::UpdateableSeqI(3pm)