Hi guys,
Please help me if u have some solution.
I have a file with three columns separated by ':' -
INPUT_FILE
C416722_2 : calin Dirigent : Dirigent
AC4174_6 : Jac : cal_co
TC4260_5 : [no : lin kite
BC426302_1 : [no : calin Dirigent lin
JC426540_3 : lin Pymo_bin : calin
TC428_3 : no7... (4 Replies)
So I have this input
1 10327 rs112750067 T C . PASS DP=65;AF=0.208;CB=BC,NCBI
1 10469 rs117577454 C G . PASS DP=2055;AF=0.020;CB=UM,BC,NCBI
1 10492 rs55998931 C T . PASS DP=231;AF=0.167;CB=BC,NCBI
1 10583 rs58108140 G A ... (3 Replies)
Hola,
How can I add a column to a existing file??
PS: The column which should be added need to be the first column and it will be a parameter from the script.
Example:
1 name1
2 name2
3 name3
4 name3
Need to add parameter $file as a first column. $file is a file name with time... (6 Replies)
Hi, long time reader, first time poster.
I've done some searching so please if this is a repeated post excuse the duplicate, but what I have are two files roughly like so:
File 1:
A W
B X
C Y
D Z
File 2:
A 1
C 2
D 3
And what I would like to get out is... (4 Replies)
Dear all,
Lets say, I've a file a.txt containing two columns, like
a1 b1
.. ..
.. ..
and another file b.txt containg two columns, like
a1 c1
.. ..
.. ..
I need to put c1 column from b.txt file to the a.txt file. So, the output should be
a1 b1 c1
.. .. ..
.. ... (4 Replies)
I have file like this
b,c
10,20
30,40
50,60
Now I want to add a new column a with fixed values for all the rows
a,b,c
60,10,20
60,30,40
60,50,60
Please let me know how can we do this in unix. (4 Replies)
Hi,
I have this data file that contains:
1 A
2 B
3 C
4 D
5 E
6 F
7 G
8 H
9 I
I want the results to be:
1 A A
2 B A
3 C A
4 D A
5 E A
6 F A
7 G A
8 H A (8 Replies)
Hi Team
I have file as below
empno,ename,sal
123,smith,1000
124,adams,2000
Required output: Using AWK
empno,ename,sal,deptno
123,smith,1000
124,adams,2000
Thanks,
Murali (5 Replies)
Hi,
I have 2 files.
file1 contains by lines: hash:salt:id
file2 contains by lines: username:hash:salt
I would like to add a new coloumn (id) form file1 to file2.
The new file should contains: username:hash:salt:id
Note: file1 contains less rows than file2.
I tried
paste -d':' file1... (12 Replies)
Discussion started by: freeroute
12 Replies
LEARN ABOUT DEBIAN
xml::sax::byrecord
XML::SAX::ByRecord(3pm) User Contributed Perl Documentation XML::SAX::ByRecord(3pm)NAME
XML::SAX::ByRecord - Record oriented processing of (data) documents
SYNOPSIS
use XML::SAX::Machines qw( ByRecord ) ;
my $m = ByRecord(
"My::RecordFilter1",
"My::RecordFilter2",
...
{
Handler => $h, ## optional
}
);
$m->parse_uri( "foo.xml" );
DESCRIPTION
XML::SAX::ByRecord is a SAX machine that treats a document as a series of records. Everything before and after the records is emitted as-
is while the records are excerpted in to little mini-documents and run one at a time through the filter pipeline contained in ByRecord.
The output is a document that has the same exact things before, after, and between the records that the input document did, but which has
run each record through a filter. So if a document has 10 records in it, the per-record filter pipeline will see 10 sets of (
start_document, body of record, end_document ) events. An example is below.
This has several use cases:
o Big, record oriented documents
Big documents can be treated a record at a time with various DOM oriented processors like XML::Filter::XSLT.
o Streaming XML
Small sections of an XML stream can be run through a document processor without holding up the stream.
o Record oriented style sheets / processors
Sometimes it's just plain easier to write a style sheet or SAX filter that applies to a single record at at time, rather than having to
run through a series of records.
Topology
Here's how the innards look:
+-----------------------------------------------------------+
| An XML:SAX::ByRecord |
| Intake |
| +----------+ +---------+ +--------+ Exhaust |
--+-->| Splitter |--->| Stage_1 |-->...-->| Merger |----------+----->
| +----------+ +---------+ +--------+ |
| ^ |
| | |
| +---------->---------------+ |
| Events not in any records |
| |
+-----------------------------------------------------------+
The "Splitter" is an XML::Filter::DocSplitter by default, and the "Merger" is an XML::Filter::Merger by default. The line that bypasses
the "Stage_1 ..." filter pipeline is used for all events that do not occur in a record. All events that occur in a record pass through the
filter pipeline.
Example
Here's a quick little filter to uppercase text content:
package My::Filter::Uc;
use vars qw( @ISA );
@ISA = qw( XML::SAX::Base );
use XML::SAX::Base;
sub characters {
my $self = shift;
my ( $data ) = @_;
$data->{Data} = uc $data->{Data};
$self->SUPER::characters( @_ );
}
And here's a little machine that uses it:
$m = Pipeline(
ByRecord( "My::Filter::Uc" ),
$out,
);
When fed a document like:
<root> a
<rec>b</rec> c
<rec>d</rec> e
<rec>f</rec> g
</root>
the output looks like:
<root> a
<rec>B</rec> c
<rec>C</rec> e
<rec>D</rec> g
</root>
and the My::Filter::Uc got three sets of events like:
start_document
start_element: <rec>
characters: 'b'
end_element: </rec>
end_document
start_document
start_element: <rec>
characters: 'd'
end_element: </rec>
end_document
start_document
start_element: <rec>
characters: 'f'
end_element: </rec>
end_document
METHODS
new
my $d = XML::SAX::ByRecord->new( @channels, \%options );
Longhand for calling the ByRecord function exported by XML::SAX::Machines.
CREDIT
Proposed by Matt Sergeant, with advise by Kip Hampton and Robin Berjon.
Writing an aggregator.
To be written. Pretty much just that "start_manifold_processing" and "end_manifold_processing" need to be provided. See
XML::Filter::Merger and it's source code for a starter.
perl v5.10.0 2009-06-11 XML::SAX::ByRecord(3pm)