05-21-2009
hmm.
Some systems have a listgroup command - did you check yours for that command?
10 More Discussions You Might Find Interesting
1. UNIX for Dummies Questions & Answers
Is there any command which can list me all the Group ID's (Primary, Secondary ) assocaited with a single user.
Thanks
Sanjay (2 Replies)
Discussion started by: sanjay92
2 Replies
2. UNIX for Dummies Questions & Answers
Hi!!,
I am on HP UX -11. I have created a new group and want to assign some the users to this group without changing their existing group ( The new group is the secondary group for them)
Any ideas how to do it??
SAM doesnt seem to be working.. Any way of doing it from command line??
... (1 Reply)
Discussion started by: jyotipg
1 Replies
3. UNIX for Advanced & Expert Users
When users login, they are directed to menu (aix script). The menu enables the user to choose an environment to work in. Each environment has a different group id. When a user chooses a menu option, I want to change his primary group to that specific environment's group id. Is this at all possible... (3 Replies)
Discussion started by: terrym
3 Replies
4. UNIX for Advanced & Expert Users
hi guys,
i am new to this DNS business and i'm having a problem.
the setup is bind 9.2.3 is installed on a sun solaris 8 server and is the primary DNS. men and mice suite is installed on another sun solaris 8 and that is our secondary DNS server.
problem is recently the secondary DNS stopped... (0 Replies)
Discussion started by: mbannout
0 Replies
5. UNIX for Dummies Questions & Answers
Hello All,
Does some one know how to synchronize the primary name server with the secondary without knowing the domains on which synchronization failed.
I have just done /usr/sbin/ndc reload
Alternatively how do i find out the domains on which synchronization failed? (4 Replies)
Discussion started by: a2z1982
4 Replies
6. Linux
Hi
New here so forgive my ignorance and inability to express myself in an informative manner ;)
I have a Fedora distribution installed on my development computer. The system we build is meant to run on a slackware dist which is all fine and well. But due to our flow of deployment I would have... (2 Replies)
Discussion started by: inquam
2 Replies
7. Solaris
Hi,
When I include a user to the secondary group "sys" GID=3 in Solaris 9 OS I'm not able to login. I get these error. The user home directory and the shell exists. Is this because of any security hardening.
# su - agent
No directory!
# su agent
su: No shell
# grep taddm /etc/passwd... (14 Replies)
Discussion started by: agent001
14 Replies
8. Shell Programming and Scripting
Dear All
I am facing a problem with my script.
I have to found the primary group of users .
So first I selected all the groups and users register from a specific user : ONE
Then I am making a file with all groups attached to the user : ONE
Then I am making a file with all... (8 Replies)
Discussion started by: Aswex
8 Replies
9. AIX
Hi,
In a Dual VIOSs setup having 4 SEA adapters each, how to find which one is Primary and Secondary.?
Regards,
Siva (2 Replies)
Discussion started by: ksgnathan
2 Replies
10. Solaris
hi there,
i using salaris 10 as my DNS server.
i have 2 dns server primary and secondary. if primary dns server i edit/update, the other secondary dns server must be sync too.
How can i configure if dns server (primary) can sync the secondary? (1 Reply)
Discussion started by: tappetmus
1 Replies
LEARN ABOUT DEBIAN
bio::tools::run::genemark
Bio::Tools::Run::Genemark(3pm) User Contributed Perl Documentation Bio::Tools::Run::Genemark(3pm)
NAME
Bio::Tools::Run::Genemark - Wrapper for local execution of the GeneMark family of programs.
SYNOPSIS
# GeneMark.hmm (prokaryotic)
my $factory =
Bio::Tools::Run::Genemark->new('-program' => 'gmhmmp',
'-m' => 'model.icm');
# Pass the factory Bio::Seq objects
# returns a Bio::Tools::Genemark object
my $genemark = $factory->run($seq);
DESCRIPTION
Wrapper module for the GeneMark family of programs. Should work with all flavors of GeneMark.hmm at least, although only the prokaryotic
version has been tested.
General information about GeneMark is available at <http://exon.gatech.edu/GeneMark/>.
Contact information for licensing inquiries is available at: <http://opal.biology.gatech.edu/GeneMark/contact.html>
Note that GeneMark.hmm (prokaryotic at least) will only process the first sequence in a fasta file (if you run() more than one sequence at
a time, only the first will be processed).
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one
of the Bioperl mailing lists. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the
web:
http://redmine.open-bio.org/projects/bioperl/
AUTHOR - Mark Johnson
Email: mjohnson-at-watson-dot-wustl-dot-edu
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
program_name
Title : program_name
Usage : $factory>program_name()
Function: gets/sets the program name
Returns: string
Args : string
program_dir
Title : program_dir
Usage : $factory->program_dir()
Function: gets/sets the program dir
Returns: string
Args : string
new
Title : new
Usage : $genemark->new(@params)
Function: creates a new Genemark factory
Returns: Bio::Tools::Run::Genemark
Args :
run
Title : run
Usage : $obj->run($seq_file)
Function: Runs Genemark
Returns : A Bio::Tools::Genemark object
Args : An array of Bio::PrimarySeqI objects
_run
Title : _run
Usage : $obj->_run()
Function: Internal(not to be used directly)
Returns : An instance of Bio::Tools::Genemark
Args : file name, sequence identifier (optional)
_write_seq_file
Title : _write_seq_file
Usage : obj->_write_seq_file($seq) or obj->_write_seq_file(@seq)
Function: Internal(not to be used directly)
Returns : Name of a temp file containing program output
Args : One or more Bio::PrimarySeqI objects
perl v5.12.3 2011-06-18 Bio::Tools::Run::Genemark(3pm)