perl one-liner with xargs for multiple input files
First list the 6 thousand files in one column, then pipe the output to xargs, telling xargs to execute perl for each file, {} is where xargs with the -i option puts the input file.
the -i.org is for perl to save an original file, and the -p, not really sure if you will need the -p with the perl script
All,
I want to combine multiple files in one file.
Something like what we do on the commad line as follows ->
cat file1 file2 file3 > Main_File.
Can something like this be done in a perl script very efficiently?
Thanks,
Rahul. (1 Reply)
Hi,
I have thousands of files in a directory that have the following 2 formats:
289620178.aln
289620179.aln
289620180.aln
289620183.aln
289620184.aln
289620185.aln
289620186.aln
289620187.aln
289620188.aln
289620189.aln
289620190.aln
289620192.aln....
and:
alnCDS_1.fasta (1 Reply)
Hi,
I want to run a Perl script on multiple files, with same name ("Data.txt") but in different directories (eg : 2010_06_09_A/Data.txt, 2010_06_09_B/Data.txt).
I know how to run this perl script on files in the same directory like:
for $i in *.txt
do
perl myscript.pl $i > $i.new... (8 Replies)
I want to write a Perl script that manipulates multiple files. In the directory, I have files 250.*chr$.ped where * is from 1 to 1000 and $ is from 1-22 for a total of 22 x 10,000 = 22,000 files.
I want to write a script that only manipulates files 250.1chr*.ped where * is from 1 to 22.... (10 Replies)
Hi every one,
Please excuse me if any grammatical mistakes is there.
I have multiple xml files in one directory, I need to create multiple XML files into one XML file.example files like this</p>
file1:bvr.xml
... (0 Replies)
I am new for Perl I want to ask one question. I have around 50 custom packages which i am using in my Perl script. I want to import all .pm packages in my Perl script in an easy way. Right now i have to import each package individually. So Is there any way to do so??
Right Now i am doing like:
... (1 Reply)
Hi
I have 100 files under file A labled 1.txt 2.txt.....100.txt(made up name)
I have 1 files under file B labled name.txt
How can i run the same perl script on 100 files and file name.txt
I want to run
perl script.pl A/1.txt B/name.txt
perl script.pl A/2.txt B/name.txt
.......
perl... (3 Replies)
How can I run the following command on multiple files and print out the corresponding multiple files.
perl script.pl genome.gff 1.txt > 1.gff
However, there are multiples files of 1.txt, from 1----100.txt
Thank you so much.
No duplicate posting! Continue here. (0 Replies)
Hi Experts,
I am querying backup status results for multiple databases and getting each and every database result in one csv file. so i need to combine all csv files in one excel file with separate tabs. I am not familiar with perl script so i am using shell script.
Could anyone please... (4 Replies)
We have the data looks like below in a log file.
I want to generat files based on the string between two hash(#) symbol like below
Source:
#ext1#test1.tale2 drop
#ext1#test11.tale21 drop
#ext1#test123.tale21 drop
#ext2#test1.tale21 drop
#ext2#test12.tale21 drop
#ext3#test11.tale21 drop... (5 Replies)
Discussion started by: Sanjeev G
5 Replies
LEARN ABOUT DEBIAN
shcomp
SHCOMP(1) User Environment Utilities SHCOMP(1)NAME
shcomp - compile a ksh93 shell script
SYNOPSIS
shcomp [ options ] [infile] [outfile]]
ORIGIN OF THIS MAN PAGE
This man page was written by Christophe Martin <Schplurtz@free.fr> for the Debian GNU/Linux system. It is based on "shcomp --man" output.
DESCRIPTION
Unless -D is specified, shcomp takes a shell script, infile, and creates a binary format file, outfile, that ksh93 can read and execute
with the same effect as the original script.
Since aliases are processed as the script is read, alias definitions whose value requires variable expansion will not work correctly.
If -D is specified, all double quoted strings that are preceded by $ are output. These are the messages that need to be translated to
locale specific versions for internationalization.
If outfile is omitted, then the results will be written to standard output. If infile is also omitted, the shell script will be read from
standard input.
OPTIONS -D, --dictionary
Generate a list of strings that need to be placed in a message catalog for internationalization.
-n, --noexec
Displays warning messages for obsolete or non-conforming constructs.
-v, --verbose
Displays input from infile onto standard error as it reads it.
--man Displays this man page on standard error and exits.
--help Shows a short help message and exits.
EXIT STATUS
0 Successful completion.
>0 An error occurred.
DEBIAN WARNING
On a Debian GNU/Linux system, more than one package may provide ksh. the output of shcomp can only be used by ksh93. Any other ksh will be
unable to run the compiled script.
EXAMPLE
( echo '#! /bin/ksh93' ; shcomp myscript ) > myscript.bin &&
chmod 755 myscript.bin
./myscript.bin
SEE ALSO ksh(1)IMPLEMENTATION
version shcomp (AT&T Labs Research) 2012-02-29
author David Korn <dgk@research.att.com>
copyright Copyright (c) 1982-2012 AT&T Intellectual Property
license http://www.eclipse.org/org/documents/epl-v10.html
KSH93 Fri Jun 3 2005 SHCOMP(1)