out of frequency Post: 302314933

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LEARN ABOUT DEBIAN

figtree

FIGTREE(1)							   User Commands							FIGTREE(1)

NAME

       figtree - graphical phylogenetic tree viewer

DESCRIPTION

       Figtree is a (phylogenetic) tree figure drawing tool.  It is designed as a graphical viewer of phylogenetic trees and as a program for pro-
       ducing publication-ready figures.  In particular it is designed to display summarized and annotated trees produced by BEAST.

AUTHOR

       Andrew Rambaut

       Institute of Evolutionary Biology

       University of Edinburgh

       a.rambaut@ed.ac.uk

       http://tree.bio.ed.ac.uk/

	      Uses the Java Evolutionary Biology Library (JEBL)

	      http://jebl.sourceforge.net/

	      Thanks to Alexei Drummond, Joseph Heled, Philippe Lemey,

	      Tulio de Oliveira, Beth Shapiro & Marc Suchard

	      Usage: figtree [-graphic <PDF|SVG|SWF|PS|EMF|GIF>] [-width <i>] [-height <i>] [-help] [<tree-file-name>] [<graphic-file-name>]

       -graphic produce a graphic with the given format

       -width the width of the graphic in pixels

       -height the height of the graphic in pixels

       -help option to print this message

	      Example: figtree test.tree Example: figtree -graphic PDF test.tree test.pdf Example: figtree -graphic GIF  -width  320  -height  320
	      test.tree test.gif

       Unrecognized argument: --version

	      FigTree v1.3.1, 2006-2009

	      Tree Figure Drawing Tool

	      Andrew Rambaut

	      Institute of Evolutionary Biology

	      University of Edinburgh

	      a.rambaut@ed.ac.uk

	      http://tree.bio.ed.ac.uk/

	      Uses the Java Evolutionary Biology Library (JEBL)

	      http://jebl.sourceforge.net/

	      Thanks to Alexei Drummond, Joseph Heled, Philippe Lemey,

	      Tulio de Oliveira, Beth Shapiro & Marc Suchard

	      Usage: figtree [-graphic <PDF|SVG|SWF|PS|EMF|GIF>] [-width <i>] [-height <i>] [-help] [<tree-file-name>] [<graphic-file-name>]

       -graphic produce a graphic with the given format

       -width the width of the graphic in pixels

       -height the height of the graphic in pixels

       -help option to print this message

	      Example:	figtree  test.tree  Example:  figtree -graphic PDF test.tree test.pdf Example: figtree -graphic GIF -width 320 -height 320
	      test.tree test.gif

SEE ALSO

       The full documentation for figtree is maintained as a Texinfo manual.  If the info and figtree programs	are  properly  installed  at  your
       site, the command

	      info figtree

       should give you access to the complete manual.

figtree 							   February 2011							FIGTREE(1)