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Special Forums UNIX and Linux Applications High Performance Computing Tuning HPL.dat for Beowulf Cluster [Linpack] Post 302313897 by mercthunder on Wednesday 6th of May 2009 11:49:01 PM
Old 05-07-2009
Tuning HPL.dat for Beowulf Cluster [Linpack]

Hi guys,
I am having some issues tuning the HPL.dat file for the Linpack benchmark test across 2 nodes. I am very new to this with minimal Linux experience, however i am trying my luck.
The specs for the two nodes are:
3GHZ QX6850 CORE 2 EXTREME (QUAD CORE)
4GB RAM
I have been typing these specs into this website:
Advanced Clustering | How do I tune my HPL.dat file? | FAQ
which apparently generates a HPL.dat for me, based on those specs. However, when i try and run the test i receive this error:
HPL ERROR from process # 0, on line 419 of function HPL_pdinfo:
>>> Need at least 8 processes for these tests <<<
HPL ERROR from process # 0, on line 621 of function HPL_pdinfo:
>>> Illegal input in file HPL.dat. Exiting ... <
The values i am entering into the HPL.dat generator are:
Nodes: 2
Cores per node: 4 (since each computer is quad core)
Memory per node: 4096
Block size: 128
I have also tried changing the cores per node value from 1 through 4 but still yields error.
I would appreciate it if anyone would be able to help me with this.
Edit:
Thought i would also paste the HPL.dat file here:


HPLinpack benchmark input file
Innovative Computing Laboratory, University of Tennessee
HPL.out output file name (if any)
8 device out (6=stdout,7=stderr,file)
1 # of problems sizes (N)
29184 Ns
1 # of NBs
128 NBs
0 PMAP process mapping (0=Row-,1=Column-major)
1 # of process grids (P x Q)
2 Ps
4 Qs
16.0 threshold
1 # of panel fact
2 PFACTs (0=left, 1=Crout, 2=Right)
1 # of recursive stopping criterium
4 NBMINs (>= 1)
1 # of panels in recursion
2 NDIVs
1 # of recursive panel fact.
1 RFACTs (0=left, 1=Crout, 2=Right)
1 # of broadcast
1 BCASTs (0=1rg,1=1rM,2=2rg,3=2rM,4=Lng,5=LnM)
1 # of lookahead depth
1 DEPTHs (>=0)
2 SWAP (0=bin-exch,1=long,2=mix)
64 swapping threshold
0 L1 in (0=transposed,1=no-transposed) form
0 U in (0=transposed,1=no-transposed) form
1 Equilibration (0=no,1=yes)
8 memory alignment in double (> 0)
##### This line (no. 32) is ignored (it serves as a separator). ######
0 Number of additional problem sizes for PTRANS
1200 10000 30000 values of N
0 number of additional blocking sizes for PTRANS
40 9 8 13 13 20 16 32 64 values of NB



Thanks.
 

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ELVTUNE(8)						      System Manager's Manual							ELVTUNE(8)

NAME
elvtune - I/O elevator tuner SYNOPSIS
elvtune [-r r_lat] [-w w_lat] [-b b_max] device... elvtune -h elvtune -v DESCRIPTION
elvtune allows to tune the I/O elevator per blockdevice queue basis. The tuning can be safely done at runtime. Tuning the elevator means being able to change disk performance and interactiveness. In the output of elvtune the address of the queue tuned will be shown and it can be considered as a queue ID. For example multiple partitions in the same harddisk will share the same queue and so tuning one partition will be like tuning the whole HD. OPTIONS
-r r_lat set the max latency that the I/O scheduler will provide on each read. -w w_lat set the max latency that the I/O scheduler will provide on each write. -b b_max max coalescing factor allowed on writes when there are reads pending in the queue. -h help. -v version. NOTE
Actually the only fields tunable are those relative to the IO scheduler. It's not possible to select a one-way or two-way elevator yet. For logical blockdevices like LVM the tuning has to be done on the physical devices. Tuning the queue of the LVM logical device is useless. RETURN VALUE
0 on success and 1 on failure. HISTORY
Ioctls for tuning elevator behaviour were added in Linux 2.3.99-pre1. AUTHORS
Andrea Arcangeli <andrea@suse.de> SuSE AVAILABILITY
The elvtune command is part of the util-linux-ng package and is available from ftp://ftp.kernel.org/pub/linux/utils/util-linux-ng/. Version 1.0 14 March 2000 ELVTUNE(8)
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