'ls' is useless here. Also you don't need a trailing ';'
Code:
#!/usr/bin/ksh
OUTFILE=infofile
for i in /home/XYZ/ASH/*.gz
do
ROW_COUNT=$(zcat "${i}" | wc -l)
printf "%-10s%s\n" "${ROW_COUNT}" "$i" >> $OUTFILE
done
Hello,
I am trying to return the name of the resulting file from a .zip archive file using unix unzip command.
unzip c07212007.cef7081.zip
Archive: c07212007.cef7081.zip
SecureZIP for z/OS by PKWARE
inflating: CEP/CEM7080/PPVBILL/PASS/G0063V00
I used the following command to unzip in... (5 Replies)
Hi,
Is there any way to get count number of lines in all files which have more than o bytes in current directory
for example :
in /user/sri/ there are 3 files
abc 0 bytes
def 5 bytes
ghi 10 bytes
i need to get wc -l for all files which have > 0 bytes at a time ..is... (6 Replies)
hi
i am pretty new to unix .i am ETL guy
I need a unix script to take row count of a file and write it to another file
the problem with wc-l is it include filename also
wc -l abc.dat
will give me like 1000 abc.dat
i just want 1000 to be written
can u just take 2 min to write a simple... (5 Replies)
hi all
plz some unix guy help me in this
i have 60 files which will have some records
i want to find the total number of records in all the 60 files
like file1 has 60 and file2 has 70 record
i want to sum all these and find total row count in 60 files (5 Replies)
I have a sorted file like:
Apple 3
Apple 5
Apple 8
Banana 2
Banana 3
Grape 31
Orange 7
Orange 13
I'd like to search $1 and if $1 is not the same as $1 in the previous row print that row and print the number of times $1 was found.
so the output would look like:
Apple 8 3
Banana... (2 Replies)
All,
I am new to shell scripting and trying to get the count of files that starts with error and with extension .out, if the count is greater than 0 and zip the file and send an email with the content of error.out file, here is my script
cd /temp
testcount =$('find . -name '*.out' -print |... (4 Replies)
Hi
I have a requirement in unix shell where I need to zip multiple files on server to one single .zip file. I dont see zip command in AIX and gzip command not doing completely what I want.
One I do .zip file, I should be able to unzip in my local Computer.
Here is example what I want... (9 Replies)
Hi all i am very new to shell scripting and need some help from you to learn
1)i have some log files that gets generated on daily basis example: i have abc_2017_01_30_1.log ,2017_01_30_2.log like wise so i want to zip this 4 logs which are created on same date into one zip folder.
2)Post zipping... (2 Replies)
Hi all i am very new to shell scripting and need some help from you to learn
1)i have some log files that gets generated on daily basis example: i have abc_2017_01_30_1.log ,2017_01_30_2.log like wise so i want to zip this 4 logs which are created on same date into one zip folder.
2)Post zipping... (1 Reply)
I have a huge file (around 4-5 GB containing 20 million rows) which has text like:
<EOFD>11<EOFD>22<EORD>2<EOFD>2222<EOFD>3333<EORD>3<EOFD>44<EOFD>55<EORD>66<EOFD>888<EOFD>9999<EORD>
Actually above is an extracted file from a Sql Server with each field delimited by <EOFD> and each row ends... (8 Replies)
Discussion started by: amvip
8 Replies
LEARN ABOUT DEBIAN
fastx_clipper
FASTX_CLIPPER(1) User Commands FASTX_CLIPPER(1)NAME
fastx_clipper - FASTA/Q Clipper
DESCRIPTION
usage: fastx_clipper [-h] [-a ADAPTER] [-D] [-l N] [-n] [-d N] [-c] [-C] [-o] [-v] [-z] [-i INFILE] [-o OUTFILE] Part of FASTX Toolkit
0.0.13.2 by A. Gordon (gordon@cshl.edu)
[-h] = This helpful help screen.
[-a ADAPTER] = ADAPTER string. default is CCTTAAGG (dummy adapter). [-l N] = discard sequences shorter than N nucleotides.
default is 5. [-d N] = Keep the adapter and N bases after it.
(using '-d 0' is the same as not using '-d' at all. which is the default).
[-c] = Discard non-clipped sequences (i.e. - keep only sequences which contained the adapter).
[-C] = Discard clipped sequences (i.e. - keep only sequences which did not contained the adapter).
[-k] = Report Adapter-Only sequences.
[-n] = keep sequences with unknown (N) nucleotides. default is to discard such sequences.
[-v] = Verbose - report number of sequences.
If [-o] is specified,
report will be printed to STDOUT.
If [-o] is not specified (and output goes to STDOUT), report will be printed to STDERR.
[-z] = Compress output with GZIP.
[-D] = DEBUG output.
[-M N] = require minimum adapter alignment length of N.
If less than N nucleotides aligned with the adapter - don't clip it.
[-i INFILE] = FASTA/Q input file. default is STDIN.
[-o OUTFILE] = FASTA/Q output file. default is STDOUT.
SEE ALSO
The quality of this automatically generated manpage might be insufficient. It is suggested to visit
http://hannonlab.cshl.edu/fastx_toolkit/commandline.html
to get a better layout as well as an overview about connected FASTX tools.
fastx_clipper 0.0.13.2 May 2012 FASTX_CLIPPER(1)