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Top Forums Shell Programming and Scripting remove trailing and leading spaces using tr command Post 302293488 by sureshg_sampat on Tuesday 3rd of March 2009 07:11:25 AM
Old 03-03-2009
Hi

Source file looks like this
cat s1.txt
3301|2009-02-01 00:00:00 |K|GGG|TR|2009-02-12 16:30:58 |ad |12

Desired Output
3301|2009-02-01 00:00:00||K|GGG|TR|2009-02-12 16:30:58||ad|12

Would appreciate if we have a command in "tr"

Regards,
Suresh
 

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gdcmtar(1)							       GDCM								gdcmtar(1)

NAME
gdcmtar - Concatenate/Extract DICOM files. SYNOPSIS
gdcmtar [options] file-in file-out DESCRIPTION
The gdcmtar is a command line tool used to tar/untar multi-frames images (including SIEMENS MOSAIC file) PARAMETERS
file-in DICOM input filename file-out DICOM output filename options options --enhance enhance (default) -U --unenhance unenhance -M --mosaic Split SIEMENS Mosaic image into multiple frames. -p --pattern Specify trailing file pattern. --root-uid Root UID. general options -h --help print this help text and exit -v --version print version information and exit -V --verbose verbose mode (warning+error). -W --warning warning mode, print warning information -E --error error mode, print error information -D --debug debug mode, print debug information environment variable GDCM_ROOT_UID Root UID Typical usage SIEMENS Mosaic $ gdcminfo MR-sonata-3D-as-Tile.dcm MediaStorage is 1.2.840.10008.5.1.4.1.1.4 [MR Image Storage] TransferSyntax is 1.2.840.10008.1.2.1 [Explicit VR Little Endian] NumberOfDimensions: 2 Dimensions: (384,384,1) ... $ gdcmtar --mosaic -i MR-sonata-3D-as-Tile.dcm -o mosaic --pattern %03d.dcm Will output: -rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic000.dcm -rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic001.dcm -rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic002.dcm -rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic003.dcm -rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic004.dcm -rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic005.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic006.dcm -rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic007.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic008.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic009.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic010.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic011.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic012.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic013.dcm -rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic014.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic015.dcm -rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic016.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic017.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic018.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic019.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic020.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic021.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic022.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic023.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic024.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic025.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic026.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic027.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic028.dcm -rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic029.dcm -rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic030.dcm $ gdcminfo mosaic000.dcm MediaStorage is 1.2.840.10008.5.1.4.1.1.4 [MR Image Storage] TransferSyntax is 1.2.840.10008.1.2.1 [Explicit VR Little Endian] NumberOfDimensions: 2 Dimensions: (64,64,1) ... SEE ALSO
gdcmdump(1), gdcmraw(1), gdcminfo(1) COPYRIGHT
Copyright (c) 2006-2011 Mathieu Malaterre Version 2.2.0 Tue Feb 5 2013 gdcmtar(1)
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