Hi all,
I have got a problem while comparing 2 text files and the result should contains the unique values(Non repeatable).
For eg:
file1.txt
1
2
3
4
file2.txt
2
3
So after comaping the above 2 files I should get only 1 and 4 as the output. Pls help me out. (7 Replies)
Hi all,
I have a huge csv file with the following format of data,
Num SNPs, 549997
Total SNPs,555352
Num Samples, 157
SNP, SampleID, Allele1, Allele2
A001,AB1,A,A
A002,AB1,A,A
A003,AB1,A,A
...
...
...
I would like to write out a list of unique SNP (column 1). Could you... (3 Replies)
Hi All,
Is there a way to get NON unique lines from 2 or more concatenated files?
Basically I have several files which are very similar with the exception of few lines and I want to find out which lines are different in each file. Very simple example is
file1 contains:
1
2
3
4
5file2... (122 Replies)
Hi All,
I have a very huge file (4GB) which has duplicate lines. I want to delete duplicate lines leaving unique lines. Sort, uniq, awk '!x++' are not working as its running out of buffer space.
I dont know if this works : I want to read each line of the File in a For Loop, and want to... (16 Replies)
Hi,
I would like to compare 2 files, and have a return code write to a file.
regardless of the files contents are the same the code should be writing to a file (if both files contents are same then return code 0).
A simple example will be great :)
Thanks (3 Replies)
hi
i have used comm -13 <(sort 1.txt) <(sort 2.txt) option to get the unique lines that are present in file 2 but not in file 1. but some how i am getting the entire file 2. i would expect few but not all uncommon lines fro my dat. is there anything wrong with the way i used the command?
my... (1 Reply)
hi
my problem is little complicated one. i have 2 files which appear like this
file 1
abbsss:aa:22:34:as akl abc 1234
mkilll:as:ss:23:qs asc abc 0987
mlopii:cd:wq:24:as asd abc 7866
file2
lkoaa:as:24:32:sa alk abc 3245
lkmo:as:34:43:qs qsa abc 0987
kloia:ds:45:56:sa acq abc 7805
i... (5 Replies)
Hello I'm having a little difficulty in writing a shell script for a few simple tasks.
First I have two files "file1.txt" and "file2.txt" and I want to read and compare the last line of each file. The files look like this.
File1.txt
File2.txt
After comparing the two lines I would... (2 Replies)
Hello Everyone!
I have updated the first post so that my intentions are easier to understand, and also attached sample files (post #18).
I have over 500 text files in a directory. Over 1 GB of data. The data in those files is organised in lines:
My intention is to return one line per... (23 Replies)
Hi,
I am trying to script the below, but I am not very good at it :(
Your help would be greatly appreciated.
1. read all files in the directory in strings
strings *.*
2. in each file, for each line that contains "ABCD", store characters located at position 521 and 522 of this line... (9 Replies)
Discussion started by: clippertm
9 Replies
LEARN ABOUT DEBIAN
h5diff
h5diff(1) General Commands Manual h5diff(1)NAME
h5diff - Compares two HDF5 files and reports the differences.
SYNOPSIS
h5diff file1 file2 [OPTIONS] [object1 [object2 ] ]
DESCRIPTION
h5diff is a command line tool that compares two HDF5 files, file1 and file2, and reports the differences between them.
Optionally, h5diff will compare two objects within these files. If only one object, object1, is specified, h5diff will compare object1 in
file1 with object1 in file2. In two objects, object1 and object2, are specified, h5diff will compare object1 in file1 with object2 in
file2. These objects must be HDF5 datasets.
object1 and object2 must be expressed as absolute paths from the respective file's root group.
Additional information, with several sample cases, can be found in the document H5diff Examples.
OPTIONS
file1 file2
The HDF5 files to be compared.
-h Print all differences.
-r Print only the names of objects that differ; do not print the differences. These objects may be HDF5 datasets, groups, or named
datatypes.
-n count
Print difference up to count differences, then stop. count must be a positive integer.
-d delta
Print only differences that are greater than the limit delta. delta must be a positive number. The comparison criterion is whether
the absolute value of the difference of two corresponding values is greater than delta (e.g., |a-b| > delta, where a is a value in
file1 and b is a value in file2).
-p relative
Print only differences that are greater than a relative error. relative must be a positive number. The comparison criterion is
whether the absolute value of the difference 1 and the ratio of two corresponding values is greater than relative (e.g., |1-(b/a)| >
relative where a is a value in file1 and b is a value in file2).
object1 object2
Specific object(s) within the files to be compared.
EXAMPLES
The following h5diff call compares the object /a/b in file1 with the object /a/c in file2:
h5diff file1 file2 /a/b /a/c
This h5diff call compares the object /a/b in file1 with the same object in file2:
h5diff file1 file2 /a/b
And this h5diff call compares all objects in both files:
h5diff file1 file2
SEE ALSO h5dump(1), h5ls(1), h5repart(1), h5import(1), gif2h5(1), h52gif(1), h5perf(1)h5diff(1)