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Top Forums Shell Programming and Scripting How can I calculate the total of nucleotide in Unix?What command line I should type? Post 302279145 by zaxxon on Thursday 22nd of January 2009 03:39:37 AM
Old 01-22-2009
Code:
awk '!/^>/ {print $0,length($0); next} {print}' infile
>HWI-EAS382_30FC7AAXX:7:1:927:1368
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 36
>HWI-EAS382_30FC7AAXX:7:1:924:1373
ACGAACTTTAAAGCACCTCTTGGCTCGTATGCCGTC 36

 

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cmddump(1)						      General Commands Manual							cmddump(1)

Name
       cmddump - simulated TRS-80 CMD file loader

Syntax
       cmddump [flags] infile [outfile startbyte nbytes]

Description
       cmddump	displays  information about TRS-80 DOS binary (command) files.	It takes an optional set of flags (described below), an input /cmd
       file, and an optional outfile, an optional starting offset of startbyte into the /cmd file, and an optional nbytes number of bytes to dump.
       Non-flag  arguments  must  be given in the order shown.	If the optional arguments are given, the given byte range is dumped from the simu-
       lated memory after loading.

Options
       -d     print detailed map; same as -m, but don't coalesce

       -i n   select ISAM entry n (0x notation OK)

       -m     print running load map as file is parsed, coalescing adjacent blocks (implies -t) (default)

       -p foo select PDS entry foo (padded to 8 bytes with spaces)

       -q     quiet; turns off -t, -m, -d, -s (later flags can override)

       -s     print summary load map after file is parsed

       -t     print text of module headers, pds headers, patch names, and copyright notices

       -x     ignore anything after the first transfer address

Author
       cmddump was written by Timothy Mann.  This man page was generated by Branden Robinson from comments in the source code.

See also
       xtrs(1)

       See the LDOS Quarterly, April 1, 1982 (Vol 1, No 4), for documentation of the TRS-80 DOS /cmd file format.  It is available on the  Web	at
       http://www.tim-mann.org/misosys.html.

								    2001-02-22								cmddump(1)
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