Sponsored Content
Top Forums Shell Programming and Scripting How can I calculate the total of nucleotide in Unix?What command line I should type? Post 302279145 by zaxxon on Thursday 22nd of January 2009 03:39:37 AM
Old 01-22-2009
Code:
awk '!/^>/ {print $0,length($0); next} {print}' infile
>HWI-EAS382_30FC7AAXX:7:1:927:1368
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 36
>HWI-EAS382_30FC7AAXX:7:1:924:1373
ACGAACTTTAAAGCACCTCTTGGCTCGTATGCCGTC 36

 

3 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

How can I remove those duplicate sequence in UNIX?What command line I should type?

The input is: >HWI-EAS382_30FC7AAXX:4:1:1580:1465 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA >HWI-EAS382_30FC7AAXX:4:1:1062:1640 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA >HWI-EAS382_30FC7AAXX:4:1:272:629 AAAAAAAAGCTATAGTCTCGTCACACATACTCACAA >HWI-EAS382_30FC7AAXX:4:1:1033:1135... (4 Replies)
Discussion started by: patrick chia
4 Replies

2. Shell Programming and Scripting

Calculate total space, total used space and total free space in filesystem names matching keyword

Good afternoon! Im new at scripting and Im trying to write a script to calculate total space, total used space and total free space in filesystem names matching a keyword (in this one we will use keyword virginia). Please dont be mean or harsh, like I said Im new and trying my best. Scripting... (4 Replies)
Discussion started by: bigben1220
4 Replies

3. Shell Programming and Scripting

Calculate the total

Hi All , I have the following script as below , I tried to modify to meet the requirement , could someone help ? very thanks ================================================================================================ while read STR NAME; do Total=0 MyString="$STR" GetData () {... (18 Replies)
Discussion started by: ust3
18 Replies
xorp(1) 						      General Commands Manual							   xorp(1)

NAME
xorpsh -- XORP Command Shell SYNOPSIS
xorpsh [-c command] [-t directory] [-e] [-h] [-v] DESCRIPTION
This manual page documents briefly the xorpsh command. This manual page was written for the Debian distribution because the original program does not have a manual page. xorpsh is the command used to interact with a eXtensible Open Router Platform (XORP) router. This command starts up a command line inter- face (CLI), that allows the configuration of the router and monitoring of the router state. The xorpsh command provides an interactive command shell to a XORP user, similar in many ways to the role played by a Unix shell. In a production router xorpsh might be set up as an user's login shell - they would login to the router via ssh and be directly in the xorpsh. It can also be run directly from the Unix command line. xorpsh should normally be run as a regular user; it is neither necessary or desirable to run it as root. If an user is to be permitted to make changes to the running router configuration, that user needs to be in the Unix group xorp. The Debian package installation automatically sets up both a xorp user and a xorp group to which this user belongs. However, any user can run the xorpsh command unless locally restricted by the administrator. OPTIONS
xorpsh allows the following options: -h Show summary of options. -v Print verbose information. -c command Specify command(s) to execute. -t directory Specify templates directory. -e Exit immediately if cannot connect to the rtrmgr SEE ALSO
xorp_rtrmgr (8) This program is documented fully in the Xorp User Manual, chapter Command Structure, available at /usr/share/doc/xorp-doc/ in Debian sys- tems when the xorp-doc package is installed. AUTHOR
XORP is Copyright (c) 2001-2009 XORP, Inc. This manual page was written by Javier Fernandez-Sanguino jfs@debian.org for the Debian system (but may be used by others). For licensing details please see /usr/share/doc/xorp/copyright. xorp(1)
All times are GMT -4. The time now is 02:48 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy