Sponsored Content
Top Forums Shell Programming and Scripting Unix script for Checking sequence Post 302261057 by jim mcnamara on Sunday 23rd of November 2008 07:38:42 AM
Old 11-23-2008
Please give sample filenames and define what "sequence" means
 

10 More Discussions You Might Find Interesting

1. UNIX for Advanced & Expert Users

Unix Boot Sequence

Hello all Unix fans. What files are involved in the Unix boot sequence, i guess there is alot of them but some must be the main files? For example the service SENDMAIL starts on our Unix machine where should i edit so that it will not start at BOOT. initd.conf? rc2.d? I hope you... (6 Replies)
Discussion started by: sajjan2
6 Replies

2. UNIX for Dummies Questions & Answers

sequence number checking

Hi there, I'm wanting to produce a shell script that will check through some file names and identify a skip in sequence (four digit seq num in file name). I have played on the idea of havng a file that has a sorted list of file names which I can read line at a time and cut out the sequence... (1 Reply)
Discussion started by: nhatch
1 Replies

3. Shell Programming and Scripting

checking jump sequence number (part2)

The following script have some bug...can you all help me: #!/bin/sh start=1 for file_number in `ls -1 /appl/CH_DATA/archive/list1/CACHE/CDBACKUPFILEJohn*.archived | sort | cut -c 48,49,50,51` do if ; then # this is the first pass of the loop, so we've got nothing to compare start=0... (3 Replies)
Discussion started by: happyv
3 Replies

4. Shell Programming and Scripting

Checking availability of Web pages through Unix script

Hi Guru's, I need to check the availability of a web page for every one hour through a script. Following is the requirement. 1. Go to http://vsn.srivsn.com 2. If any error encountered in openeing the home page, it should trigger an email with the appropriate error message. 3. If page opens... (6 Replies)
Discussion started by: srivsn
6 Replies

5. UNIX for Dummies Questions & Answers

creating sequence numbers in unix

Hi, Is there a way to create sequence numbers in unix i have a set of batches(which contain records) and i want to assign a number to every batch. how can i do that? (1 Reply)
Discussion started by: dnat
1 Replies

6. Shell Programming and Scripting

How can I remove those duplicate sequence in UNIX?What command line I should type?

The input is: >HWI-EAS382_30FC7AAXX:4:1:1580:1465 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA >HWI-EAS382_30FC7AAXX:4:1:1062:1640 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA >HWI-EAS382_30FC7AAXX:4:1:272:629 AAAAAAAAGCTATAGTCTCGTCACACATACTCACAA >HWI-EAS382_30FC7AAXX:4:1:1033:1135... (4 Replies)
Discussion started by: patrick chia
4 Replies

7. Homework & Coursework Questions

Unix space checking script

Use and complete the template provided. The entire template must be completed. If you don't, your post may be deleted! 1. The problem statement, all variables and given/known data: Im still pretty new to this and could really use some help with this task "Write a script to check in the... (12 Replies)
Discussion started by: krolike
12 Replies

8. Shell Programming and Scripting

find common entries and match the number with long sequence and cut that sequence in output

Hi all, I have a file like this ID 3BP5L_HUMAN Reviewed; 393 AA. AC Q7L8J4; Q96FI5; Q9BQH8; Q9C0E3; DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot. DT 05-JUL-2004, sequence version 1. DT 05-SEP-2012, entry version 71. FT COILED 59 140 ... (1 Reply)
Discussion started by: manigrover
1 Replies

9. UNIX for Advanced & Expert Users

Checking missing data's sequence (shell script | UNIX command)

Dear All members, i have some trouble here, i want to ask your help. The case is: I have some data, it's like: -ABCD1234 -ABCD1235 -ABCD1237 -BCDE1111 -BCDE1112 -BCDE1114 there is some missing data's sequence (the format is: ABCD = name 1234 = sequence). I want to print the... (2 Replies)
Discussion started by: septian.tri
2 Replies

10. Shell Programming and Scripting

Help with writing a script to run java commands in sequence in UNIX

Hi, Brand new to these forums, and I hope that someone can help me out. I'm trying to run the following command in UNIX java -jar GenomeAnalysisTK.jar -T SplitSamFile -dt NONE -R reference.fa -I my.bam --outputRoot /my/path/SampleFiles/Sample_ It executes the SplitSamFile from GATK, but I... (3 Replies)
Discussion started by: Wixaros
3 Replies
RENAME(1)						 Perl Programmers Reference Guide						 RENAME(1)

NAME
rename - renames multiple files SYNOPSIS
rename [ -v ] [ -n ] [ -f ] perlexpr [ files ] DESCRIPTION
"rename" renames the filenames supplied according to the rule specified as the first argument. The perlexpr argument is a Perl expression which is expected to modify the $_ string in Perl for at least some of the filenames specified. If a given filename is not modified by the expression, it will not be renamed. If no filenames are given on the command line, filenames will be read via standard input. For example, to rename all files matching "*.bak" to strip the extension, you might say rename 's/.bak$//' *.bak To translate uppercase names to lower, you'd use rename 'y/A-Z/a-z/' * OPTIONS
-v, --verbose Verbose: print names of files successfully renamed. -n, --no-act No Action: show what files would have been renamed. -f, --force Force: overwrite existing files. ENVIRONMENT
No environment variables are used. AUTHOR
Larry Wall SEE ALSO
mv(1), perl(1) DIAGNOSTICS
If you give an invalid Perl expression you'll get a syntax error. BUGS
The original "rename" did not check for the existence of target filenames, so had to be used with care. I hope I've fixed that (Robin Barker). perl v5.12.4 2011-08-10 RENAME(1)
All times are GMT -4. The time now is 09:56 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy