Howdy,
I need to convert an association data matrix, currently in a two-column format, into a matrix with numbers indicating the number of associations. I've been looking around for AWK code in the list, but could not find anything. Here's an example of what I want to perform:
original... (10 Replies)
Hi all,
Is there a way to convert full data matrix to linearised left data matrix?
e.g full data matrix
Bh1 Bh2 Bh3 Bh4 Bh5 Bh6 Bh7
Bh1 0 0.241058 0.236129 0.244397 0.237479 0.240767 0.245245
Bh2 0.241058 0 0.240594 0.241931 0.241975 ... (8 Replies)
Hi,
Some assistance with respect to the following problem will be very helpful.
I want to reformat my dataset in the following manner for subsequent analysis.
I have first column values (which repeat for each value of 2nd column) which are names, the second column specifies position ad the... (1 Reply)
Hi all,
I have a complex (beyond my biological expertise) problem at hand.
I need to merge multiple files into 1 big matrix. Please help me with some code.
Inp1
Ang_0 chr1 98 T A
Ang_0 chr1 352 G A
Ang_0 chr1 425 C T
Ang_0 chr2 ... (1 Reply)
Hello, hopefully this is an easy on for the AWK guru's out there. I'm having some trouble figuring out how to match+merge data in 2 files into 1 single report.
I've got my 2 files filtered and delimited, just need to MATCH $3 in file1 to $1 in file2, then put $0 from File1 and $2+$3 from File2... (6 Replies)
:confused:Hello -- i just joined the forums. I am a complete noob -- only about 1 week into learning how to program anything... and starting with linux.
I am working in Linux terminal.
I have a folder with a bunch of txt files. Each file has several lines of html code. I want to combine... (2 Replies)
Hi Experts,
I have created multiple scripts and send the output to new file, getting this output to my mailbox on daily basis.
I would like to send the all outputs to a single file, need to merge all file outputs on a single file.
For example,
Created script for
df -h > df.doc
grep... (7 Replies)
Copy data from other file to paste
cat file1:
Name: server1.data.com
data1 server1 running
Name: server3.data.com
data3 server3 running
cat file2:
server1 good
server2 bad
network not ok
server3 good
Output: (10 Replies)
I have 42 text files; each containing up to 34 lines with following structure;
file1
H-01 23
H-03 5
H-05 9
H-02 14
.
.
file2
H-01 17
H-02 43
H-04 7
H-05 8
H-03 7
.
.
file3 (6 Replies)
Discussion started by: Syeda Sumayya
6 Replies
LEARN ABOUT SUSE
unbuffer
UNBUFFER(1) General Commands Manual UNBUFFER(1)NAME
unbuffer - unbuffer output
SYNOPSIS
unbuffer program [ args ]
INTRODUCTION
unbuffer disables the output buffering that occurs when program output is redirected from non-interactive programs. For example, suppose
you are watching the output from a fifo by running it through od and then more.
od -c /tmp/fifo | more
You will not see anything until a full page of output has been produced.
You can disable this automatic buffering as follows:
unbuffer od -c /tmp/fifo | more
Normally, unbuffer does not read from stdin. This simplifies use of unbuffer in some situations. To use unbuffer in a pipeline, use the
-p flag. Example:
process1 | unbuffer -p process2 | process3
CAVEATS
unbuffer -p may appear to work incorrectly if a process feeding input to unbuffer exits. Consider:
process1 | unbuffer -p process2 | process3
If process1 exits, process2 may not yet have finished. It is impossible for unbuffer to know long to wait for process2 and process2 may
not ever finish, for example, if it is a filter. For expediency, unbuffer simply exits when it encounters an EOF from either its input or
process2.
In order to have a version of unbuffer that worked in all situations, an oracle would be necessary. If you want an application-specific
solution, workarounds or hand-coded Expect may be more suitable. For example, the following example shows how to allow grep to finish pro-
cessing when the cat before it finishes first. Using cat to feed grep would never require unbuffer in real life. It is merely a place-
holder for some imaginary process that may or may not finish. Similarly, the final cat at the end of the pipeline is also a placeholder
for another process.
$ cat /tmp/abcdef.log | grep abc | cat
abcdef
xxxabc defxxx
$ cat /tmp/abcdef.log | unbuffer grep abc | cat
$ (cat /tmp/abcdef.log ; sleep 1) | unbuffer grep abc | cat
abcdef
xxxabc defxxx
$
BUGS
The man page is longer than the program.
SEE ALSO
"Exploring Expect: A Tcl-Based Toolkit for Automating Interactive Programs" by Don Libes, O'Reilly and Associates, January 1995.
AUTHOR
Don Libes, National Institute of Standards and Technology
1 June 1994 UNBUFFER(1)