08-26-2008
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi,
I have a file which is:-
1 6 4 8 2 3
2 1 9 3 2 1
3 3 5 6 3 1
4 9 7 8 2 3
I would like to sort from field $2 to field $6 for each of the line to:-
1 2 3 4 6 8
2 1 1 2 3 9
3 1 3 3 5 6
4 2 3 7 8 9
I came across this Arrays on example 26-6. But it is much complicated. I am... (7 Replies)
Discussion started by: ahjiefreak
7 Replies
2. Shell Programming and Scripting
Hi,
I'm trying to read a file containing lines with spaces in them.
The inputfile looks like this
------------------------------
Command1 arg1 arg2
Command2 arg5 arg6 arg7
-------------------------------
The shell code looks like this...
lines=`awk '{ print }' inputfile`
... (2 Replies)
Discussion started by: a-gopal
2 Replies
3. Shell Programming and Scripting
I'm trying to reformat some tide information into a useable format and failing.
Input file is....
4452 CHENNAI (MADRAS)
13°06'N, 80°18'E India East Coast 01 June 2009 UT(GMT)
Data Area 3. Indian Ocean (northern part) and Red Sea to Singapore
01/06/2009
00:00 0.7 m
00:20 0.7 m
00:40... (3 Replies)
Discussion started by: garethsays
3 Replies
4. UNIX for Dummies Questions & Answers
Hi Everyone,
I have an input file in the following format:
score.file1.txt
contig00045 length=566 numreads=19 1047 0.0
contig00055 length=524 numreads=7 793 0.0
contig00052 length=535 numreads=10 607 e-176
contig00072 length=472 numreads=46 571 e-165... (8 Replies)
Discussion started by: Fahmida
8 Replies
5. Shell Programming and Scripting
I would like to write a script to extend this command to a general case:
BEGIN {s_0=0;n_0=0}{n_0++;s_0+=($51-$1)^2}END {print sqrt(s_0/n_0)}
i.e. so that
BEGIN {s_0=0;n_0=0}{n_0++;s_0+=($51-$1)^2}END {print sqrt(s_0/n_0)}
BEGIN {s_1=0;n_1=0}{n_1++;s_1+=($51-$2)^2}END {print... (3 Replies)
Discussion started by: chrisjorg
3 Replies
6. UNIX for Dummies Questions & Answers
Hi, I am also a newbie in awk and trying to find solution of my problem.
I have one reference file 1.txt with 2 columns and I want to search other 10 files (a.txt, b.txt......h.txt each with 5 columns) corresponding to the values of 2nd column from 1.txt. If the value from 2nd column from 1.txt... (0 Replies)
Discussion started by: bioinfo
0 Replies
7. Shell Programming and Scripting
Hi, I have two files: atom.txt and g.txt
atom.txt has multiple patterns but I am showing only two patterns each ending with ENDMDL:
ATOM 1 N SER A 1 35.092 83.194 140.076 1.00 0.00 N
ATOM 2 CA SER A 1 35.216 83.725 138.725 1.00 0.00 C
TER
ENDMDL
ATOM 1 N SER A 1 35.683 81.326 139.778 1.00... (11 Replies)
Discussion started by: bioinfo
11 Replies
8. Shell Programming and Scripting
Hi, I am also a newbie in awk and trying to find solution of my problem.
I have one reference file 1.txt with 2 columns and I want to search other 10 files (a.txt, b.txt......h.txt each with 5 columns) corresponding to the values of 2nd column from 1.txt. If the value from 2nd column from 1.txt... (33 Replies)
Discussion started by: bioinfo
33 Replies
9. Shell Programming and Scripting
Hi
I am a newbie starting bash and I have a simple need to return the result of an operation from awk to bash. basically I want to use awk to tell me if "#" exists in a string, and then back in bash, i want to do an IF statement on this return in order to do other things. In my bash shell I... (2 Replies)
Discussion started by: oahmad
2 Replies
10. UNIX for Dummies Questions & Answers
Hi!
I have a new problem with awk, this time I think is because I'm using it in bash and I don't know how to put the valor of the variable in awk. Here is the code:
#!/bin/bash
for i in 1 2 3 4 5
do
a=$i
b=$
awk '$1>=a&&$1<=b {print $1,$2,$3}'>asdf test... (3 Replies)
Discussion started by: florpi
3 Replies
LEARN ABOUT DEBIAN
apsfilter-bug
APSFILTER-BUG(1) BSD General Commands Manual APSFILTER-BUG(1)
NAME
apsfilter-bug -- create a half-automatic bug report for apsfilter
SYNOPSIS
apsfilter-bug
OPTIONS
none
DESCRIPTION
With the apsfilter-bug script you can automatically create a bug report for apsfilter(1). A template report file is created which you can
edit with your favourite editor ( emacs(1) by default, or whatever is entered in the environment variable EDITOR ).
You will see a couple of lines starting with '#'; these lines will be removed before the report is sent. So if you want to use the '#' char-
acter at the beginning of a line, just indent it with a space.
A very important piece of the bug report is the debugging log created by aps2file(1), probably with a command like
aps2file -D -o /dev/null [-P...] [-Z...] [input] 2> log.txt
Unless you don't even have a chance to create a debugging log, it is crucial for serious bug hunting.
After you have filled in as much (useful) information as possible, you must save the file under its original name, then exit your editor.
If you invoked apsfilter-bug by accident, or if you need some additional system information to include into the bug report, just exit your
editor without saving the file.
NOTES
In addition to the stuff you've edited, some more information is appended to the bug report automatically:
apsfilter version 7.2.6-stable
ghostscript version (from 'gs --version')
system id (from 'uname -a')
configure options --prefix=/usr --sysconfdir=/etc --mandir=/usr/share/man --with-awk=/usr/bin/awk --with-sendmail=/usr/sbin/sendmail
shell executable /bin/bash
awk executable /usr/bin/awk
sendmail executable /usr/sbin/sendmail
FILES
/usr/bin/aps2file script to create debugging output
SEE ALSO
apsfilter(1), aps2file(1)
BUGS
See apsfilter software center - http://www.apsfilter.org/ - for new versions, bugfixes and known bugs.
Please use the new tool apsfilter-bug(1) to release bug- or problem reports. It automatically presents you a form in an editor window which
asks you some standard questions. If you save and quit the editor session, then this report is sent automatically via e-mail to the proper
apsfilter mailinglist.
If apsfilter fails to print something or prints it in a way you wouldn't expect and you want to report an apsfilter error then please save
the debugging output of one print session using the new aps2file(1) utility by typing aps2file -D -Z options file > /dev/null 2> file.debug
and including the debugging output in the file file.debug into the edit session of the apsfilter-bug utility, so that it is included into the
mail to the apsfilter mailinglist.
Please note that you need to run /bin/sh (Bourne Shell), bash or a compatible shell, so that the above mentioned output redirection works.
Under C-shell (/bin/csh) or tcsh it would't work. If you don't know, then simply make sure you use the Bournce shell by typing /bin/sh or
bash, then you should have no problems with redirection of stdout and stderr (> /dev/null 2> file.debug).
DOCUMENTATION
See official apsfilter homepage
http://www.apsfilter.org/handbook.html Apsfilter Handbook including the Frequently Asked Questions (FAQ)
USER FORUM
Please send questions to the official apsfilter help channel apsfilter-help@apsfilter.org. The above section BUGS and the file
HOWTO-BUGREPORTS tells you how to report bugs. If you want to know how to troubleshoot your apsfilter installation, please read the manpage
aps2file(1) and apsfilter-bug(1) as well as the Apsfilter Handbook carefully.
HISTORY
The apsfilter-bug manpage has been written by Michael LoBin <phallobst@web.de> and first appeared in apsfilter V 7.1.0.
BSD
Dec 26, 2001 BSD