04-25-2008
awk '$2~/^D/{print $2}' donors.txt | cut -d";" -f1
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LEARN ABOUT DEBIAN
bio::graphics::glyph::splice_site
Bio::Graphics::Glyph::splice_site(3pm) User Contributed Perl Documentation Bio::Graphics::Glyph::splice_site(3pm)
NAME
Bio::Graphics::Glyph::splice_site - The "splice_site" glyph
SYNOPSIS
See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>.
DESCRIPTION
This glyph was designed to show an inverted "L" representing splice donors and acceptors. The vertical part of the L points downwards and
is positioned in the center of the range (even if the range is quite large).
In addition to the usual glyph options, this glyph recognizes:
Option Value Description
------ ----- -----------
direction "left" or "right" direction the short part of the L
points
height_fraction 0.0 - 1.0 fractional height of the glyph,
usually a callback that uses the
feature's score to determine its
height
BUGS
Please report them.
SEE ALSO
Bio::Graphics::Panel, Bio::Graphics::Glyph, Bio::Graphics::Glyph::arrow, Bio::Graphics::Glyph::cds, Bio::Graphics::Glyph::crossbox,
Bio::Graphics::Glyph::diamond, Bio::Graphics::Glyph::dna, Bio::Graphics::Glyph::dot, Bio::Graphics::Glyph::ellipse,
Bio::Graphics::Glyph::extending_arrow, Bio::Graphics::Glyph::generic, Bio::Graphics::Glyph::graded_segments,
Bio::Graphics::Glyph::heterogeneous_segments, Bio::Graphics::Glyph::line, Bio::Graphics::Glyph::pinsertion, Bio::Graphics::Glyph::primers,
Bio::Graphics::Glyph::rndrect, Bio::Graphics::Glyph::chromosome, Bio::Graphics::Glyph::segments, Bio::Graphics::Glyph::ruler_arrow,
Bio::Graphics::Glyph::toomany, Bio::Graphics::Glyph::transcript, Bio::Graphics::Glyph::transcript2, Bio::Graphics::Glyph::translation,
Bio::Graphics::Glyph::triangle, Bio::DB::GFF, Bio::SeqI, Bio::SeqFeatureI, Bio::Das, GD
AUTHOR
Xiaokang Pan <pan@cshl.org>
Copyright (c) 2001 BDGP
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for
disclaimers of warranty.
perl v5.14.2 2012-02-20 Bio::Graphics::Glyph::splice_site(3pm)