Hello,
In a unix shell script,i want to round a variabele to a nearest number
Ex: set count=104.4
How can i round that to 105.?
Thanks,
Sateesh (2 Replies)
Hi, I have a problem. Basically I dont know how to use awk. I have a script (below) which works fine.
What I want to do is somehow "pipe" in the input say 4.5 and have it give the anwer, I dont want ot have to type it in, since it will be running in a script.
Any ideas how to do this????
... (1 Reply)
Hey everyone, I was wondering if i am able to write a sed command to round a number to two decimal places. So for example:
1.58674
would be
1.58
I just want to chop off the numbers to the right of the second digit after the period. I know this is probably trivial but the closest i got was... (8 Replies)
Hi All,
I would like to do the following in the shell script
561.76 to 562
I tried using this echo 'scale=0; 749 * 75 /100 ' | bc
but just returned only 561
Please help me . I appreciate your help
Thanks
rajeevm (13 Replies)
Hi Guys,
i am having a csv file where i need to round off numerical column to 2 decimal precision in specific columns. i need to ignore the first two line i.e the header columns and manipulate rest of the lines of the csv file. My columns are specific i.e i need to round off only 2nd,4th and... (13 Replies)
Input file:
USA 20.5683
UK 3.54221
Japan 2.54001
China 2.50897
Germany 2.05816
.
.
Desired output file:
USA 20.57
UK 3.54
Japan 2.54
China 2.51
Germany 2.06
.
. (2 Replies)
Hi,
I want to round of decimal numbers in comma seperated lines till 2 decimal numbers.
line will be like.
... (4 Replies)
Discussion started by: vishal0746
4 Replies
LEARN ABOUT DEBIAN
fastx_quality_stats
FASTX_QUALITY_STATS(1) User Commands FASTX_QUALITY_STATS(1)NAME
fastx_quality_stats - FASTX Statistics
DESCRIPTION
usage: fastx_quality_stats [-h] [-N] [-i INFILE] [-o OUTFILE] Part of FASTX Toolkit 0.0.13.2 by A. Gordon (gordon@cshl.edu)
[-h] = This helpful help screen. [-i INFILE] = FASTQ input file. default is STDIN. [-o OUTFILE] = TEXT output file. default is
STDOUT. [-N] = New output format (with more information per nucleotide/cycle).
The *OLD* output TEXT file will have the following fields (one row per column):
column = column number (1 to 36 for a 36-cycles read solexa file)
count = number of bases found in this column.
min = Lowest quality score value found in this column.
max = Highest quality score value found in this column.
sum = Sum of quality score values for this column.
mean = Mean quality score value for this column.
Q1 = 1st quartile quality score.
med = Median quality score.
Q3 = 3rd quartile quality score.
IQR = Inter-Quartile range (Q3-Q1).
lW = 'Left-Whisker' value (for boxplotting).
rW = 'Right-Whisker' value (for boxplotting).
A_Count = Count of 'A' nucleotides found in this column. C_Count = Count of 'C' nucleotides found in this column. G_Count = Count
of 'G' nucleotides found in this column. T_Count = Count of 'T' nucleotides found in this column. N_Count = Count of 'N' nucleo-
tides found in this column. max-count = max. number of bases (in all cycles)
The *NEW* output format:
cycle (previously called 'column') = cycle number max-count For each nucleotide in the cycle (ALL/A/C/G/T/N):
count = number of bases found in this column.
min = Lowest quality score value found in this column.
max = Highest quality score value found in this column.
sum = Sum of quality score values for this column.
mean = Mean quality score value for this column.
Q1 = 1st quartile quality score.
med = Median quality score.
Q3 = 3rd quartile quality score.
IQR = Inter-Quartile range (Q3-Q1).
lW = 'Left-Whisker' value (for boxplotting).
rW = 'Right-Whisker' value (for boxplotting).
SEE ALSO
The quality of this automatically generated manpage might be insufficient. It is suggested to visit
http://hannonlab.cshl.edu/fastx_toolkit/commandline.html
to get a better layout as well as an overview about connected FASTX tools.
fastx_quality_stats 0.0.13.2 May 2012 FASTX_QUALITY_STATS(1)