:) have you tried awk... and pipe the actual start and end dates in the directory you're looking for when i go through my directories and look for certain matching files thats what i do
except I am not quite sure what you are asking for so I can't give an exact example
awk -f script file |... (0 Replies)
I am trying to find any line with the 9th column's number greater than 200, but why the following awk command does not work?
awk '$9 > 200' /tmp/test
2007-09-05 10:13:05.714 640.847 any 1.2.3.4 719 2445 487260 32 6082 199
2007-09-05 10:13:02.686 641.827... (2 Replies)
Hi. I've been playing around a bit. This isn't for any practical purpose-- it's really just a theoretical exercise. I wrote this little thing:
foreach num ( 6 5 4 )
awk -v "number=$num" 'BEGIN{for(x=0;x<$number;x++) printf "-"; printf "\n"}'
end
I would expect the following output:
... (3 Replies)
If there exists a field in stdin, print it, otherwise, print hello.....
These print nothing:
cat /dev/null | awk '{if ( length > 0 ) print $1; else print "hello"}'
cat /dev/null | awk '{if ( $1 ) print $1; else print "hello"}'But the scripts work if I run them directly in a terminal:
... (8 Replies)
hi guys,
i want to parse a file using public function, the file contain raw data in the below format i want to get the output like this to load it to Oracle DB
MARWA1,BSS:26,1,3,0,0,0,0,0.00,22,22,22.00
MARWA2,BSS:26,1,3,0,0,0,0,0.00,22,22,22.00
this the file raw format:
Number of... (6 Replies)
Hello all!
I have problem in hp-ux 11.11 in awk
I want to grep sar -d 2 1 only 3 column, but have error in awk in hp-ux 11.11
Example:
#echo 123 234 | awk '{print $2}'
123 234
The situattions in commands bdf | awk {print $5}' some...
In hp-ux 11.31 - OK!
How resolve problem (15 Replies)
So, I have an awk statement that does a little filtering and formats the output conveniently. Here's what I had originally:
<input> | awk -F "\t" 'BEGIN{OFS=","} {sub(" ","_",$2)} (NR == 1) || (substr($2,9,2) >= 19 && substr($2,1,7) == "2011-02") {print}'
That did what I wanted, except that... (2 Replies)
Heyas
Trying to parse a tempfile, but somehow i mess up.
To my understand, this should work...
Plain:
tail -n1 out.tmp
1 81.5M 1 1066k 0 0 359k 0 0:03:52 0:00:02 0:03:50 359k
I want to get the 81.5M, so i'd assume it'll be $2 for awk....
tail -n1 out.tmp | awk... (24 Replies)
Discussion started by: sea
24 Replies
LEARN ABOUT DEBIAN
asn2xml
ASN2XML(1) NCBI Tools User's Manual ASN2XML(1)NAME
asn2xml - translate biological data from ASN.1 to XML
SYNOPSIS
asn2xml [-] [-b F] [-e] [-i filename] [-l filename] [-o filename] [-s]
DESCRIPTION
asn2xml converts an NCBI Seq-entry or Bioseq-set from ASN.1 format to an isomorphic XML representation. It differs from asn2asn -x in that
it converts packed sequence data back into human-readable ASCII text.
OPTIONS
A summary of options is included below.
- Print usage message
-b F Input asnfile in text mode
-e Input is a Seq-entry
-i filename
Read ASN.1 from filename (default is stdin)
-l filename
Log errors to filename (default is stderr)
-o filename
Write XML to filename (default is stdout)
-s Input is a Seq-submit
AUTHOR
The National Center for Biotechnology Information.
SEE ALSO asn2all(1), asn2asn(1), asn2ff(1), asn2fsa(1), asn2gb(1), asndhuff(1), gene2xml(1), /usr/share/doc/ncbi-tools-bin/README.asn2xml,
/usr/share/doc/libncbi6/ncbixml.txt.gz
NCBI 2005-05-16 ASN2XML(1)