I'm trying to run the make command in cygwin.
The directory is d:\resiprocate-1.2.3\resip\dum\test.
But the command outputs:
cant open perl script "c:\Program": No such file or directory
why??...check the attached JPEG file....plz help
hi everyone. i have a problem on installing binary file in my cygwin. could anyone help me wat command should i use to install it ?
thanks a lot (4 Replies)
I have managed a successful install of Cygwin (after a few tries), and like any sensible person am ignoring the console in favour of the xconsole. I have this set up how I want - tcsh, all hot-keys (including ^z for suspend) and et cetera, but find it awfully slow. Are there any good... (7 Replies)
i am completely new to unix and am trying to learn with cygwin.
my problem is simple....
when i use the 'man' command, eg 'man cat'
id do not know how to get out of the manual!!!?
if i type '!' and Return,
rather than having just the $ prompt, it has 'sh-3.2$' as a command prompt.... (1 Reply)
hello ... i am new with cygwin ... and i want you to help me. ...
First of all, i want to determine the steady state stream function in a 2-D duct using a square mesh by using the finite-difference methodology and i want to simulate it....and i read a lot of information at... (1 Reply)
hi....
i want to set an alias to "ls -lart" permanently. i am using cygwin and in that .bashrc and .bash_profile files are readonly.
so please tell me how i can do that?
thanks (1 Reply)
I started to gather some stats from our windows servers through the use of cygwin and sshd :)
is anyone else doing this sort of thing?
interested in some other indicators I should be checking for...
thanks,
manny
the following is only an example of the type of data I am able to... (4 Replies)
I'm using cygwin on win7, What I would like to do is something like this:
cygstart cygwin tail -f /foo/test.log | perl -pe 's/error/\e
I know I can start a new instance using either of these:
mintty -e ...
cygstart tail ...
But neither of those open in ANSI mode, so I can't do... (0 Replies)
Do clear command do not work in cygwin.. (4 Replies)
Discussion started by: parthmittal2007
4 Replies
LEARN ABOUT DEBIAN
cd-hit-para
CD-HIT-PARA.PL(1) User Commands CD-HIT-PARA.PL(1)NAME
cd-hit-para.pl - divide a big clustering job into pieces to run cd-hit or cd-hit-est jobs
SYNOPSIS
cd-hit-para.pl options
DESCRIPTION
This script divide a big clustering job into pieces and submit jobs to remote computers over a network to make it parallel. After
all the jobs finished, the script merge the clustering results as if you just run a single cd-hit or cd-hit-est.
You can also use it to divide big jobs on a single computer if your computer does not have enough RAM (with -L option).
Requirements:
1 When run this script over a network, the directory where you
run the scripts and the input files must be available on all the remote hosts with identical path.
2 If you choose "ssh" to submit jobs, you have to have
passwordless ssh to any remote host, see ssh manual to know how to set up passwordless ssh.
3 I suggest to use queuing system instead of ssh,
I currently support PBS and SGE
4 cd-hit cd-hit-2d cd-hit-est cd-hit-est-2d
cd-hit-div cd-hit-div.pl must be in same directory where this script is in.
Options
-i input filename in fasta format, required
-o output filename, required
--P program, "cd-hit" or "cd-hit-est", default "cd-hit"
--B filename of list of hosts,
requred unless -Q or -L option is supplied
--L number of cpus on local computer, default 0
when you are not running it over a cluster, you can use this option to divide a big clustering jobs into small pieces, I suggest you
just use "--L 1" unless you have enough RAM for each cpu
--S Number of segments to split input DB into, default 64
--Q number of jobs to submit to queue queuing system, default 0
by default, the program use ssh mode to submit remote jobs
--T type of queuing system, "PBS", "SGE" are supported, default PBS
--R restart file, used after a crash of run
-h print this help
More cd-hit/cd-hit-est options can be speicified in command line
Questions, bugs, contact Weizhong Li at liwz@sdsc.edu
cd-hit-para.pl 4.6-2012-04-25 April 2012 CD-HIT-PARA.PL(1)