10-04-2007
It was worth trying to go through each point step by step. You seem to be doing all the right things.
I've used Linux to Windows RAS successfully before but not using the callback option.
When in doubt try the simplest configuration possible, but here it looks like the Windows RAS box has no desire to send you anything, that's why I think you need somebody at the RAS server end to assist you.
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LEARN ABOUT DEBIAN
cmtk-detect_adni_phantom
detect_adni_phantom(1) The Computational Morphometry Toolkit detect_adni_phantom(1)
NAME
detect_adni_phantom - Detect ADNI phantom landmarks in phantom image
SYNOPSIS
detect_adni_phantom InputImage OutputXML
DESCRIPTION
This tool detects the locations of all spherical landmarks in a 3D image of the Magphan EMR051 structural imaging phantom (a.k.a. ADNI
Phantom).
OPTIONS
Global Toolkit Options (these are shared by all CMTK tools)
--help
Write list of basic command line options to standard output.
--help-all
Write complete list of basic and advanced command line options to standard output.
--wiki
Write list of command line options to standard output in MediaWiki markup.
--man
Write man page source in 'nroff' markup to standard output.
--version
Write toolkit version to standard output.
--echo
Write the current command line to standard output.
--verbose-level <integer>
Set verbosity level.
--verbose, -v
Increment verbosity level by 1 (deprecated; supported for backward compatibility).
--threads <integer>
Set maximum number of parallel threads (for POSIX threads and OpenMP).
Main Options
--write-labels <image-path>
Output label image path. This image contains the mask of detected spheres, each labeled uniquely in their order in CMTK's ADNI phantom
fiducial table. [Default: NONE]
--write-rigid <transformation-path>
Output path for the fitted rigid transformation from phantom space into RAS image standard space. This transformation defines where
each sphere should be in the image. [Default: NONE]
--write-affine <transformation-path>
Output path for the fitted affine transformation from phantom space into RAS image standard space. This is the closest linear-fit
transformation, and as such it includes scale and shear components not present in the fitted rigid transformations. Since these compo-
nents are due to scanner miscalibration and distortion, this transformation DOES NOT specify the correct spehre locations in the
image, but rather, allows for quantification of scale miscalibration. [Default: NONE]
AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. Russakoff
LICENSE
http://www.fsf.org/licensing/licenses/gpl.html
BUGS
Report bugs at http://nitrc.org/projects/cmtk/
ACKNOWLEDGMENTS
From April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and
Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing).
CMTK 2.2.2 Jul 20 2012 detect_adni_phantom(1)